RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 NKAPQ8N5F7 415 aaKnown RBP7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 ATG16L2Q8NAA4 619 aa7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 CYP2W1Q8TAV3 490 aa7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 DNAJB14Q8TBM8 379 aa7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 HERPUD2Q9BSE4 406 aa7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 GBA2Q9HCG7 927 aaPredicted RBP7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 SERTAD3Q9UJW9 196 aa7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 ZMYND8Q9ULU4 1186 aaPredicted RBP7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 SSX2IPQ9Y2D8 614 aa7.12□□□□□ -1.27
TOM1L1-216ENST00000573607 SPATA31A3Q5VYP0 1347 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 A0A0B4J269 797 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 GAGE12BA1L429 117 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 HNRNPDLO14979 420 aaKnown RBP7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 PIP5K1BO14986 540 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 NPC1O15118 1278 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 FOXD2O60548 495 aaPredicted RBP7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 SRGAP2O75044 1071 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 SOAT2O75908 522 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 CSTBP04080 98 aaKnown RBP7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 ERBB2P04626 1255 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 CSF1RP07333 972 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 C1SP09871 688 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 ADORA2AP29274 412 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 CD6P30203 668 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 VAV2P52735 878 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 PRKAG1P54619 331 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 TUBB3Q13509 450 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 BLMHQ13867 455 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 HLXQ14774 488 aaPredicted RBP7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 SPDYE7PQ495Y7 208 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 BOD1Q96IK1 185 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 SNX27Q96L92 541 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 PCDHAC1Q9H158 963 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 GALNT9Q9HCQ5 603 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 TM7SF3Q9NS93 570 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 GRHPRQ9UBQ7 328 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 DKK2Q9UBU2 259 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 TESMINQ9Y4I5 508 aa7.11□□□□□ -1.27
TOM1L1-216ENST00000573607 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 KCNQ3O43525 872 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 RGS10O43665 173 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 CDKL5O76039 1030 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 INMTO95050 263 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 SPDEFO95238 335 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 PDHA1P08559 390 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 PECAM1P16284 738 aaPredicted RBP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 DDX6P26196 483 aaKnown RBP eCLIP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 DGCR2P98153 550 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 TP53BP2Q13625 1128 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 ZACNQ401N2 412 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 NRN1LQ496H8 165 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 TMTC4Q5T4D3 741 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 FAM109AQ8N4B1 249 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 MYRIPQ8NFW9 859 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 SLC30A5Q8TAD4 765 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 STYXQ8WUJ0 223 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 DVL3Q92997 716 aaPredicted RBP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 ZBTB45Q96K62 511 aaPredicted RBP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 NELL2Q99435 816 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 EIF2AQ9BY44 585 aaKnown RBP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 AMBRA1Q9C0C7 1298 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 TMEM74BQ9NUR3 256 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 PARPBPQ9NWS1 579 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 AURKAIP1Q9NWT8 199 aaPredicted RBP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 LRFN1Q9P244 771 aa7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 SCAF8Q9UPN6 1271 aaKnown RBP7.1□□□□□ -1.27
TOM1L1-216ENST00000573607 TRGV11A0A075B6L2 103 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 SKAP2O75563 359 aaPredicted RBP7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 TNFRSF6BO95407 300 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 HGFP14210 728 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 PPP3CBP16298 524 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 ZNF20P17024 532 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 MAGEA10P43363 369 aaPredicted RBP7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 SATB1Q01826 763 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 E2F2Q14209 437 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 SPARCL1Q14515 664 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 PDCD2Q16342 344 aaPredicted RBP7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 C4orf46Q504U0 113 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 MANEALQ5VSG8 457 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 TLDC1Q6P9B6 456 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 CCDC28AQ8IWP9 274 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 SLC25A43Q8WUT9 341 aaPredicted RBP7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 CCT6BQ92526 530 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 RMDN3Q96TC7 470 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 KRTAP4-12Q9BQ66 201 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 ZNF703Q9H7S9 590 aaPredicted RBP7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 LUZP4Q9P127 313 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 CNOT11Q9UKZ1 510 aaKnown RBP7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 HPSEQ9Y251 543 aa7.09□□□□□ -1.27
TOM1L1-216ENST00000573607 hCG_1642624A0A1W2PR95 340 aa7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 TRIM38O00635 465 aa7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 PPM1DO15297 605 aa7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 TRIAP1O43715 76 aa7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 LMNAP02545 664 aaKnown RBP7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 HLA-DOAP06340 250 aa7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 LAG3P18627 525 aa7.08□□□□□ -1.28
TOM1L1-216ENST00000573607 NTSR1P30989 418 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms