RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KIAA0895Q8NCT3 520 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 TRMT2BQ96GJ1 504 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 LRRC3BQ96PB8 259 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 PKMYT1Q99640 499 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 MRPL45Q9BRJ2 306 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 IER2Q9BTL4 223 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 SCAND2PQ9GZW5 306 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 CRTAC1Q9NQ79 661 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 RBM12Q9NTZ6 932 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 TDP1Q9NUW8 608 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 CCL26Q9Y258 94 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 PCDHGA2Q9Y5H1 932 aa10.31□□□□□ -0.76
NPLOC4-212ENST00000573328 SHISA7A6NL88 538 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 LRRIQ3A6PVS8 624 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 CALUO43852 315 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 TACC1O75410 805 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 TADA3O75528 432 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 NR3C1P04150 777 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MYL1P05976 194 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 USP17L7P0C7H9 530 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 WEE1P30291 646 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 ATICP31939 592 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MAGEA11P43364 429 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 NDUFA8P51970 172 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MLLT6P55198 1093 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MYL6P60660 151 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 FZD5Q13467 585 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 ZNF667Q5HYK9 610 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 TRIM68Q6AZZ1 485 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 FAM171BQ6P995 826 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 TXNDC11Q6PKC3 985 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 DENND5BQ6ZUT9 1274 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MON1AQ86VX9 555 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 ZNF516Q92618 1163 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 USP13Q92995 863 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 CCDC34Q96HJ3 373 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 PCED1BQ96HM7 432 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MED10Q9BTT4 135 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 PRMT8Q9NR22 394 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 NCDNQ9UBB6 729 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 HPSEQ9Y251 543 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 FRMD4BQ9Y2L6 1034 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 SPAG17Q6Q759 2223 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 DMXL1Q9Y485 3027 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 ATP8B3O60423 1300 aa10.3□□□□□ -0.76
NPLOC4-212ENST00000573328 EML5Q05BV3 1969 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 F8VP50 259 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 PDXKO00764 312 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 ABL1P00519 1130 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 CHRNB1P11230 501 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 P4HA1P13674 534 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 PIK3CAP42336 1068 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 RAP1GAPP47736 663 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 CXCL12P48061 93 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 IFNAR2P48551 515 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 PDE6CP51160 858 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 AP3M2P53677 418 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 NRLP54845 237 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 FAM160A1Q05DH4 1040 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 RUNX3Q13761 415 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 NCOA4Q13772 614 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 BECN1Q14457 450 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 MTF1Q14872 753 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 DGKKQ5KSL6 1271 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 KIAA2013Q8IYS2 634 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 B3GALNT2Q8NCR0 500 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 MYCBPAPQ8TBZ2 947 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 PARD3BQ8TEW8 1205 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 RUBCNQ92622 972 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 SECISBP2LQ93073 1101 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 FAM126AQ9BYI3 521 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 ELOVL4Q9GZR5 314 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 DPEP3Q9H4B8 488 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 SMYD3Q9H7B4 428 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 RAB23Q9ULC3 237 aa10.29□□□□□ -0.76
NPLOC4-212ENST00000573328 EP300Q09472 2414 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 GVINP1Q7Z2Y8 2422 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 C2orf78A6NCI8 922 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 CLDN5O00501 218 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 ARSAP15289 507 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 PTPN1P18031 435 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 TRIM21P19474 475 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 CDH8P55286 799 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 AMPD2Q01433 879 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SATB1Q01826 763 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms