RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 BASP1P80723 227 aaKnown RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 MYO1EQ12965 1108 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 SURF1Q15526 300 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 HADHQ16836 314 aaKnown RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 C3orf62Q6ZUJ4 267 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 XYLT1Q86Y38 959 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 KCTD6Q8NC69 237 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 C12orf65Q9H3J6 166 aaKnown RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 UBN1Q9NPG3 1134 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 IRF6O14896 467 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 PRPF4O43172 522 aaKnown RBP eCLIP11.77□□□□□ -0.52
RPAIN-212ENST00000573126 B4GALT4O60513 344 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 TMEM63AO94886 807 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 MIPP30301 263 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.52
RPAIN-212ENST00000573126 BBS9Q3SYG4 887 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 SH3PXD2AQ5TCZ1 1133 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 BBS12Q6ZW61 710 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 RFX6Q8HWS3 928 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 PPIL6Q8IXY8 311 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 FBXO36Q8NEA4 188 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 ERP27Q96DN0 273 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 KLF6Q99612 283 aaPredicted RBP11.77□□□□□ -0.52
RPAIN-212ENST00000573126 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.52
RPAIN-212ENST00000573126 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.52
RPAIN-212ENST00000573126 M0QYV0 167 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 SLC8A1P32418 973 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 ARL4CP56559 192 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 GEMIN4P57678 1058 aaKnown RBP11.77□□□□□ -0.53
RPAIN-212ENST00000573126 ZNF268Q14587 947 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-212ENST00000573126 RAB6CQ53S08 254 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 WLSQ5T9L3 541 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 WDR78Q5VTH9 848 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 RNF43Q68DV7 783 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 EFCAB12Q6NXP0 572 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 GPATCH11Q8N954 259 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 NAT8LQ8N9F0 302 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 SLC4A11Q8NBS3 891 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 RAB6CQ9H0N0 254 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 FZD8Q9H461 694 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
RPAIN-212ENST00000573126 WDR91A4D1P6 747 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 GPR25O00155 361 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MED7O43513 233 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 TYROBPO43914 113 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 EZRP15311 586 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 PDK4Q16654 411 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 CELF3Q5SZQ8 465 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 HHATQ5VTY9 493 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 JADE1Q6IE81 842 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 LVRNQ6Q4G3 990 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 NPNTQ6UXI9 565 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ZC3H18Q86VM9 953 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 UBA3Q8TBC4 463 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MAGEC3Q8TD91 643 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 FBF1Q8TES7 1133 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 GRAMD1AQ96CP6 724 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 PAFAH2Q99487 392 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MYLK2Q9H1R3 596 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 LHX5Q9H2C1 402 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ETNK1Q9HBU6 452 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 TXNRD2Q9NNW7 524 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 SMG5Q9UPR3 1016 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 LACTBL1A8MY62 500 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 SOCS7O14512 581 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 GRAP2O75791 330 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MICAL2O94851 1124 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 RBP3P10745 1247 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 EIF3EP60228 445 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MBTD1Q05BQ5 628 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ACCSLQ4AC99 568 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 EFHC2Q5JST6 749 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 FAM102AQ5T9C2 384 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ATP11CQ8NB49 1132 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 AGAP11Q8TF27 550 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 FNIP1Q8TF40 1166 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 STAMBPL1Q96FJ0 436 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 PIWIL1Q96J94 861 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 BCO2Q9BYV7 579 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 MAF1Q9H063 256 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 ARHGEF3Q9NR81 526 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 SENP1Q9P0U3 644 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 SLC24A2Q9UI40 661 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 XPO7Q9UIA9 1087 aaKnown RBP11.76□□□□□ -0.53
RPAIN-212ENST00000573126 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 CHMP2BQ9UQN3 213 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 STARD13Q9Y3M8 1113 aa11.76□□□□□ -0.53
RPAIN-212ENST00000573126 GAS2O43903 313 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms