RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 PROSER1Q86XN7 944 aa13.21□□□□□ -0.29
SMIM28-201ENST00000573100 CHCHD4Q8N4Q1 142 aa13.21□□□□□ -0.29
SMIM28-201ENST00000573100 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
SMIM28-201ENST00000573100 WHAMMQ8TF30 809 aa13.21□□□□□ -0.29
SMIM28-201ENST00000573100 PNMA5Q96PV4 448 aa13.21□□□□□ -0.29
SMIM28-201ENST00000573100 PLIN2Q99541 437 aa13.21□□□□□ -0.29
SMIM28-201ENST00000573100 ASXL3Q9C0F0 2248 aa13.21□□□□□ -0.29
SMIM28-201ENST00000573100 SMG1Q96Q15 3661 aaKnown RBP13.21□□□□□ -0.3
SMIM28-201ENST00000573100 HELZ2Q9BYK8 2649 aaKnown RBP13.21□□□□□ -0.3
SMIM28-201ENST00000573100 SCN1AP35498 2009 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 DENND4CQ5VZ89 1909 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 ANTXRLA6NF34 631 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 MYMKA6NI61 221 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 TADA3O75528 432 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 CFIP05156 583 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 ACOT2P49753 483 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 GFPT1Q06210 699 aaPredicted RBP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 SV2CQ496J9 727 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 HYIQ5T013 277 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 C19orf48Q6RUI8 117 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 ALLCQ8N6M5 410 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 FSIP1Q8NA03 581 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 LRRC15Q8TF66 581 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 BCCIPQ9P287 314 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 MBD1Q9UIS9 605 aaPredicted RBP13.2□□□□□ -0.3
SMIM28-201ENST00000573100 PILRBQ9UKJ0 227 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
SMIM28-201ENST00000573100 SEC24BO95487 1268 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 KLF8O95600 359 aaPredicted RBP13.19□□□□□ -0.3
SMIM28-201ENST00000573100 CAPNS1P04632 268 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 TCF3P15923 654 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ITPKAP23677 461 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 HOXD12P35452 270 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 KCNB1Q14721 858 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 MAP7D1Q3KQU3 841 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 SOWAHCQ53LP3 525 aaPredicted RBP13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 SLC39A4Q6P5W5 647 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 TXNDC5Q8NBS9 432 aaKnown RBP13.19□□□□□ -0.3
SMIM28-201ENST00000573100 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 LLPHQ9BRT6 129 aaKnown RBP13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 APC2O95996 2303 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 ANK1P16157 1881 aa13.19□□□□□ -0.3
SMIM28-201ENST00000573100 MYH11P35749 1972 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 K7ENM7 598 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 SGK1O00141 431 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 OPHN1O60890 802 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 TIE1P35590 1138 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 PNPLA4P41247 253 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 PDE6CP51160 858 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 FAM193AP78312 1265 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 SCAPQ12770 1279 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 HNRNPDQ14103 355 aaKnown RBP13.18□□□□□ -0.3
SMIM28-201ENST00000573100 DUOXA1Q1HG43 343 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 GAB4Q2WGN9 574 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
SMIM28-201ENST00000573100 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 RAB44Q7Z6P3 723 aaPredicted RBP13.18□□□□□ -0.3
SMIM28-201ENST00000573100 PDZD3Q86UT5 571 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 PDCL2Q8N4E4 241 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 IL17RCQ8NAC3 791 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 FAM184AQ8NB25 1140 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 HMGB4Q8WW32 186 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 PNKPQ96T60 521 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
SMIM28-201ENST00000573100 GTF3C4Q9UKN8 822 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
SMIM28-201ENST00000573100 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
SMIM28-201ENST00000573100 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
SMIM28-201ENST00000573100 TRAK2O60296 914 aa13.17□□□□□ -0.3
SMIM28-201ENST00000573100 HUS1O60921 280 aa13.17□□□□□ -0.3
SMIM28-201ENST00000573100 FAM13AO94988 1023 aa13.17□□□□□ -0.3
SMIM28-201ENST00000573100 KAT7O95251 611 aa13.17□□□□□ -0.3
SMIM28-201ENST00000573100 SERPINF2P08697 491 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms