RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 GCOM2Q9BZD3 368 aaPredicted RBP17.12■□□□□ 0.33
POLR2A-201ENST00000572844 ACTL7BQ9Y614 415 aa17.12■□□□□ 0.33
POLR2A-201ENST00000572844 CDH16O75309 829 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ENDOD1O94919 500 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 TRUB2O95900 331 aaKnown RBP17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
POLR2A-201ENST00000572844 CPP00450 1065 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 SETSIPP0DME0 302 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 IRX5P78411 483 aaPredicted RBP17.11■□□□□ 0.33
POLR2A-201ENST00000572844 GPS1Q13098 491 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 RNASEH2BQ5TBB1 312 aaKnown RBP17.11■□□□□ 0.33
POLR2A-201ENST00000572844 GLIS1Q8NBF1 620 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 CNPY3Q9BT09 278 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ZWILCHQ9H900 591 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 EURLQ9NYK6 297 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 SMAPO00193 183 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ORC1Q13415 861 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ZBTB6Q15916 424 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 GKAP1Q5VSY0 366 aaPredicted RBP17.11■□□□□ 0.33
POLR2A-201ENST00000572844 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 TADA2BQ86TJ2 420 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ACSF2Q96CM8 615 aaPredicted RBP17.11■□□□□ 0.33
POLR2A-201ENST00000572844 SEC16BQ96JE7 1060 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 SNX27Q96L92 541 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 PPCSQ9HAB8 311 aa17.11■□□□□ 0.33
POLR2A-201ENST00000572844 ALOX15BO15296 676 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 CST8O60676 142 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 GPD1P21695 349 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 MIPP30301 263 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
POLR2A-201ENST00000572844 QPCTQ16769 361 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 PRUNE1Q86TP1 453 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 TDRPQ86YL5 185 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 CACNA2D3Q8IZS8 1091 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 TMEM130Q8N3G9 435 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 OTUD6BQ8N6M0 293 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 EMC1Q8N766 993 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 ACTL9Q8TC94 416 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 PWWP2AQ96N64 755 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
POLR2A-201ENST00000572844 DNAJC17Q9NVM6 304 aaKnown RBP17.1■□□□□ 0.33
POLR2A-201ENST00000572844 USP18Q9UMW8 372 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
POLR2A-201ENST00000572844 SMIM35A0A1B0GVV1 85 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 A6NJR5 290 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 C2CD4BA6NLJ0 364 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 APOC4-APOC2K7ER74 178 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 DPYSL4O14531 572 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 GPR32O75388 356 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 APOC2P02655 101 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 PFKMP08237 780 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 ZSCAN5DPP0CG00 497 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 CYP3A5P20815 502 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 RDXP35241 583 aaKnown RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 OTUD4Q01804 1114 aaKnown RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 NR1H3Q13133 447 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 PKDCCQ504Y2 493 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 FAM102AQ5T9C2 384 aaPredicted RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 SPRYD7Q5W111 196 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 KCTD6Q8NC69 237 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 P3H4Q92791 437 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 TSPAN18Q96SJ8 248 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 SAYSD1Q9NPB0 183 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 TSPAN16Q9UKR8 245 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 SGK1O00141 431 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 NPTXRO95502 500 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 PECAM1P16284 738 aaPredicted RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 AXLP30530 894 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 SNX16P57768 344 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 PLCB3Q01970 1234 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 RASA2Q15283 850 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 NPLOC4Q8TAT6 608 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 UBA3Q8TBC4 463 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 PRCCQ92733 491 aaPredicted RBP17.09■□□□□ 0.33
POLR2A-201ENST00000572844 USP6NLQ92738 828 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 C9orf72Q96LT7 481 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 NCAPGQ9BPX3 1015 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 TMEM121Q9BTD3 319 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
POLR2A-201ENST00000572844 ANKRD65E5RJM6 399 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 F2P00734 622 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 ETS1P14921 441 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.33
POLR2A-201ENST00000572844 SMTNL2Q2TAL5 461 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 NOTUMQ6P988 496 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 VSTM1Q6UX27 236 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 ALKAL1Q6UXT8 129 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 CENPUQ71F23 418 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 VSIG1Q86XK7 387 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 BEST2Q8NFU1 509 aa17.08■□□□□ 0.33
POLR2A-201ENST00000572844 STK32AQ8WU08 396 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms