RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 KIAA2013Q8IYS2 634 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 SPEM1Q8N4L4 309 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 DCLK2Q8N568 766 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 KIAA0895Q8NCT3 520 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 RIN3Q8TB24 985 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 GOLGA5Q8TBA6 731 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 EPC1Q9H2F5 836 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 SNX25Q9H3E2 840 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 TRPC7Q9HCX4 862 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 SMG5Q9UPR3 1016 aaKnown RBP18.52■□□□□ 0.56
LITAF-211ENST00000572255 NME7Q9Y5B8 376 aa18.52■□□□□ 0.56
LITAF-211ENST00000572255 A0A1B0GVL5 298 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 TACC1O75410 805 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 CMA1P23946 247 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 GNL1P36915 607 aaPredicted RBP18.51■□□□□ 0.55
LITAF-211ENST00000572255 CASP4P49662 377 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 MYL6P60660 151 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 TNNC1P63316 161 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 CYP27A1Q02318 531 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 TRPC3Q13507 836 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 RUNX3Q13761 415 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 WDR72Q3MJ13 1102 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 TRIM68Q6AZZ1 485 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 Q6ZS52 159 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 MYCBPAPQ8TBZ2 947 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 PLEKHO2Q8TD55 490 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 PCED1BQ96HM7 432 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 SPATA17Q96L03 361 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 SPATA32Q96LK8 384 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 SLC22A12Q96S37 553 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 EBF3Q9H4W6 596 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 NCDNQ9UBB6 729 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 ZDHHC9Q9Y397 364 aa18.51■□□□□ 0.55
LITAF-211ENST00000572255 DCHS1Q96JQ0 3298 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 TRAV19A0A0A6YYK7 116 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 PHACTR2O75167 634 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 STAU1O95793 577 aaKnown RBP18.5■□□□□ 0.55
LITAF-211ENST00000572255 CKMP06732 381 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 FAM163BP0C2L3 166 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 USP17L7P0C7H9 530 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 ATICP31939 592 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 GRIK1P39086 918 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 ID4P47928 161 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 FAM160A1Q05DH4 1040 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 PSMD2Q13200 908 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 CCINQ13939 588 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 KMT5BQ4FZB7 885 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 MDH1BQ5I0G3 518 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 CC2D1AQ6P1N0 951 aaPredicted RBP18.5■□□□□ 0.55
LITAF-211ENST00000572255 FSIP1Q8NA03 581 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 OR6B3Q8NGW1 331 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 CEP295NLQ96MC4 621 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 CYP2S1Q96SQ9 504 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 XYLT2Q9H1B5 865 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 USP25Q9UHP3 1055 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 HPSEQ9Y251 543 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 CEP250Q9BV73 2442 aa18.5■□□□□ 0.55
LITAF-211ENST00000572255 HELZP42694 1942 aaKnown RBP18.49■□□□□ 0.55
LITAF-211ENST00000572255 OTOL1A6NHN0 477 aaPredicted RBP18.49■□□□□ 0.55
LITAF-211ENST00000572255 ARSAP15289 507 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 ANXA13P27216 316 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 KRT85P78386 507 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 BIRC3Q13489 604 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 MTF1Q14872 753 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 PDGFRLQ15198 375 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 TDRD10Q5VZ19 366 aaKnown RBP18.49■□□□□ 0.55
LITAF-211ENST00000572255 SYNPOQ8N3V7 929 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 PARD3BQ8TEW8 1205 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 SYAP1Q96A49 352 aaPredicted RBP18.49■□□□□ 0.55
LITAF-211ENST00000572255 DPEP3Q9H4B8 488 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 DMAC2Q9NW81 257 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 GCNT4Q9P109 453 aa18.49■□□□□ 0.55
LITAF-211ENST00000572255 NXF1Q9UBU9 619 aaKnown RBP18.49■□□□□ 0.55
LITAF-211ENST00000572255 CACNA1AO00555 2505 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 C2orf78A6NCI8 922 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 LRRIQ3A6PVS8 624 aaPredicted RBP18.48■□□□□ 0.55
LITAF-211ENST00000572255 TRIM66O15016 1216 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 PAPSS2O95340 614 aaPredicted RBP18.48■□□□□ 0.55
LITAF-211ENST00000572255 PTPN1P18031 435 aaKnown RBP18.48■□□□□ 0.55
LITAF-211ENST00000572255 USP46P62068 366 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 USP4Q13107 963 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 KCNB1Q14721 858 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 ZNF77Q15935 545 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 DENND5BQ6ZUT9 1274 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 SLC9A9Q8IVB4 645 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 ARL14EPQ8N8R7 260 aaPredicted RBP18.48■□□□□ 0.55
LITAF-211ENST00000572255 TTC16Q8NEE8 873 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 CHFRQ96EP1 664 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 KCTD10Q9H3F6 313 aa18.48■□□□□ 0.55
LITAF-211ENST00000572255 A8MXQ7 604 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 CHURC1-FNTBB4DL54 471 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 F8VP50 259 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 K7ESF4 209 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 PDXKO00764 312 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 MYL1P05976 194 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 FNTBP49356 437 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 AP3M2P53677 418 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 CLDN10P78369 228 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms