RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
CHMP6-202ENST00000571457 TMEM74BQ9NUR3 256 aa12.21□□□□□ -0.45
CHMP6-202ENST00000571457 BCCIPQ9P287 314 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHMP6-202ENST00000571457 PILRBQ9UKJ0 227 aa12.21□□□□□ -0.45
CHMP6-202ENST00000571457 C2CD2Q9Y426 696 aa12.21□□□□□ -0.45
CHMP6-202ENST00000571457 SCN1AP35498 2009 aa12.21□□□□□ -0.46
CHMP6-202ENST00000571457 OBSL1O75147 1896 aa12.21□□□□□ -0.46
CHMP6-202ENST00000571457 ANK1P16157 1881 aa12.21□□□□□ -0.46
CHMP6-202ENST00000571457 A0A0B4J269 797 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 MYMKA6NI61 221 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 EIF4E1BA6NMX2 242 aaKnown RBP12.2□□□□□ -0.46
CHMP6-202ENST00000571457 AP5Z1O43299 807 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 NOL4O94818 638 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 PIGRP01833 764 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 CAPNS1P04632 268 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 NFICP08651 508 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 SERPINF2P08697 491 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 TCF3P15923 654 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 SV2CQ496J9 727 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 EOGTQ5NDL2 527 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
CHMP6-202ENST00000571457 C19orf48Q6RUI8 117 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
CHMP6-202ENST00000571457 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 PI4K2AQ9BTU6 479 aa12.2□□□□□ -0.46
CHMP6-202ENST00000571457 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
CHMP6-202ENST00000571457 URB1O60287 2271 aaKnown RBP12.2□□□□□ -0.46
CHMP6-202ENST00000571457 PTPRDP23468 1912 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 KALRNO60229 2985 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 KPNA7A9QM74 516 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 PFKLP17858 780 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 HDCP19113 662 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 ITPKAP23677 461 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 ABCD1P33897 745 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 OPRD1P41143 372 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 PRPHP41219 470 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 SCAPQ12770 1279 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
CHMP6-202ENST00000571457 DDR2Q16832 855 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 DTHD1Q6ZMT9 781 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 PGBD3Q8N328 593 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
CHMP6-202ENST00000571457 SPATA18Q8TC71 538 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 SLC22A12Q96S37 553 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 LINC00597Q9H2U6 94 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 CCDC86Q9H6F5 360 aaKnown RBP12.19□□□□□ -0.46
CHMP6-202ENST00000571457 DPP3Q9NY33 737 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 GCNT4Q9P109 453 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 MBD1Q9UIS9 605 aaPredicted RBP12.19□□□□□ -0.46
CHMP6-202ENST00000571457 ARHGAP26Q9UNA1 814 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 TCHHQ07283 1943 aa12.19□□□□□ -0.46
CHMP6-202ENST00000571457 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 TADA3O75528 432 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 KLF8O95600 359 aaPredicted RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 APODP05090 189 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 SYPP08247 313 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 EIF2DP41214 584 aaKnown RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 PNPLA4P41247 253 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 GPR15P49685 360 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 POU5F1Q01860 360 aaKnown RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 SLC14A1Q13336 389 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 COL28A1Q2UY09 1125 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 MAP7D1Q3KQU3 841 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 SDHAF4Q5VUM1 108 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 SLC36A4Q6YBV0 504 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 MINDY1Q8N5J2 469 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 ALLCQ8N6M5 410 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 ARL14EPQ8N8R7 260 aaPredicted RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 IL17RCQ8NAC3 791 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 TXNDC5Q8NBS9 432 aaKnown RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 STKLD1Q8NE28 680 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 FBXO18Q8NFZ0 1043 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 HMGB4Q8WW32 186 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 ADAMTS14Q8WXS8 1223 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 CDK5RAP3Q96JB5 506 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 PNKPQ96T60 521 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 ACBD6Q9BR61 282 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 TMLHEQ9NVH6 421 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 PCDHB9Q9Y5E1 797 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 CELSR3Q9NYQ7 3312 aa12.18□□□□□ -0.46
CHMP6-202ENST00000571457 TNRC6BQ9UPQ9 1833 aaKnown RBP12.18□□□□□ -0.46
CHMP6-202ENST00000571457 PLXND1Q9Y4D7 1925 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 MYO18AQ92614 2054 aaKnown RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 SGK1O00141 431 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 KAT7O95251 611 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 PLA2G4BP0C869 781 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 HNRNPLP14866 589 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 CYP2F1P24903 491 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 TIE1P35590 1138 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms