RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 CCDC90BQ9GZT6 254 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.97■□□□□ 0.15
CIITA-204ENST00000570546 RNF181Q9P0P0 153 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 USP18Q9UMW8 372 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 REXO2Q9Y3B8 237 aaKnown RBP15.97■□□□□ 0.15
CIITA-204ENST00000570546 FER1L4A9Z1Z3 1794 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 RGL2O15211 777 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 SEC24DO94855 1032 aaPredicted RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 KCNA2P16389 499 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 FOXD4Q12950 439 aaPredicted RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 SAMD7Q7Z3H4 446 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 ZKSCAN4Q969J2 545 aaPredicted RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 DNAJC19Q96DA6 116 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 PDCD2LQ9BRP1 358 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 PCDH9Q9HC56 1237 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 OLA1Q9NTK5 396 aaKnown RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 VCPP55072 806 aaKnown RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 KCNA1Q09470 495 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 SLC4A9Q96Q91 983 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 DCDC2Q9UHG0 476 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 BTNL10A8MVZ5 291 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 AKAP10O43572 662 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 TLR2O60603 784 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 CYP2C8P10632 490 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 TCN1P20061 433 aaPredicted RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 DSG1Q02413 1049 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 PDAP1Q13442 181 aaKnown RBP15.96■□□□□ 0.15
CIITA-204ENST00000570546 PARD3BQ8TEW8 1205 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 DNAJC18Q9H819 358 aa15.96■□□□□ 0.15
CIITA-204ENST00000570546 SETD3Q86TU7 594 aaPredicted RBP15.96■□□□□ 0.14
CIITA-204ENST00000570546 KIRREL3Q8IZU9 778 aa15.96■□□□□ 0.14
CIITA-204ENST00000570546 IPMKQ8NFU5 416 aa15.96■□□□□ 0.14
CIITA-204ENST00000570546 CEP19Q96LK0 163 aa15.96■□□□□ 0.14
CIITA-204ENST00000570546 GCNAQ96QF7 691 aa15.96■□□□□ 0.14
CIITA-204ENST00000570546 PPME1Q9Y570 386 aa15.96■□□□□ 0.14
CIITA-204ENST00000570546 DNALI1O14645 258 aaPredicted RBP15.95■□□□□ 0.14
CIITA-204ENST00000570546 CYP3A4P08684 503 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 CALB2P22676 271 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
CIITA-204ENST00000570546 ZBTB17Q13105 803 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 SLC26A11Q86WA9 606 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 GALNT4Q8N4A0 578 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 TNFRSF25Q93038 417 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 LRRC4BQ9NT99 713 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 SLC8A2Q9UPR5 921 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 DYNC1LI2O43237 492 aaPredicted RBP15.95■□□□□ 0.14
CIITA-204ENST00000570546 MTSS1O43312 755 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 BGNP21810 368 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 GCNT1Q02742 428 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 PCSK7Q16549 785 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 SCFD2Q8WU76 684 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 NDFIP2Q9NV92 336 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 STX18Q9P2W9 335 aaKnown RBP15.95■□□□□ 0.14
CIITA-204ENST00000570546 FAM8A1Q9UBU6 413 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 C3P01024 1663 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 ABCE1P61221 599 aaKnown RBP15.95■□□□□ 0.14
CIITA-204ENST00000570546 FAM172AQ8WUF8 416 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 PPP1R2P1Q96PQ5 205 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 CCDC134Q9H6E4 229 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 KCNQ5Q9NR82 932 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 TJP2Q9UDY2 1190 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 SHOC2Q9UQ13 582 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 MON2Q7Z3U7 1717 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 PTPN4P29074 926 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 ITGB3BPQ13352 177 aaPredicted RBP15.95■□□□□ 0.14
CIITA-204ENST00000570546 DCAF4L1Q3SXM0 396 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 NAPEPLDQ6IQ20 393 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 MREGQ8N565 214 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 EMC1Q8N766 993 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 SHCBP1LQ9BZQ2 653 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 TAS2R14Q9NYV8 317 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 RICTORQ6R327 1708 aa15.95■□□□□ 0.14
CIITA-204ENST00000570546 RNF225M0QZC1 329 aaPredicted RBP15.94■□□□□ 0.14
CIITA-204ENST00000570546 FSBPO95073 299 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 CPB1P15086 417 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 VCAM1P19320 739 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 FUT2Q10981 343 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 PTK6Q13882 451 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 COBLL1Q53SF7 1204 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 AADACL2Q6P093 401 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 BEGAINQ9BUH8 593 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 KIAA1257Q9ULG3 409 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 ASTN1O14525 1302 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 hCG_2014768A0A024R1R8 64 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 MAGEA13PA6NCF6 341 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 HNRNPH3P31942 346 aaKnown RBP15.94■□□□□ 0.14
CIITA-204ENST00000570546 CRYMQ14894 314 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 NOTUMQ6P988 496 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 C1orf186Q6ZWK4 172 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 SCUBE1Q8IWY4 988 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 SLC25A41Q8N5S1 370 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 KIF17Q9P2E2 1029 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 DPEP1P16444 411 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 GRIK5Q16478 980 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 ACOT1Q86TX2 421 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 LNX1Q8TBB1 728 aaPredicted RBP15.94■□□□□ 0.14
CIITA-204ENST00000570546 ACTL9Q8TC94 416 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 CALML6Q8TD86 181 aa15.94■□□□□ 0.14
CIITA-204ENST00000570546 SDR42E2A6NKP2 422 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms