RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TMEM35BQ8NCS4 154 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 MYCBPAPQ8TBZ2 947 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 MICAL1Q8TDZ2 1067 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 SLC20A1Q8WUM9 679 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 ARNTL2Q8WYA1 636 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 PIK3R5Q8WYR1 880 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 PPP2R3CQ969Q6 453 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 MYLPFQ96A32 169 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 TIFAQ96CG3 184 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 TRIM11Q96F44 468 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 SMARCD1Q96GM5 515 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 POM121Q96HA1 1249 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 TWNKQ96RR1 684 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 AGPAT1Q99943 283 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 TCF25Q9BQ70 676 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 C17orf80Q9BSJ5 609 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 EMILIN2Q9BXX0 1053 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 MIS12Q9H081 205 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 ZBP1Q9H171 429 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 DPEP3Q9H4B8 488 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 NHEJ1Q9H9Q4 299 aaPredicted RBP6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 TLR9Q9NR96 1032 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 ABI2Q9NYB9 513 aaPredicted RBP6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 ARHGAP20Q9P2F6 1191 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 MAP10Q9P2G4 905 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 MTRRQ9UBK8 725 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 NOCTQ9UK39 431 aaKnown RBP6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 TSPAN16Q9UKR8 245 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 CNTN6Q9UQ52 1028 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 LZTS1Q9Y250 596 aa6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 YBX2Q9Y2T7 364 aaKnown RBP6.98□□□□□ -1.29
CTDNEP1-204ENST00000570484 C5orf67F2Z3F1 127 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 RNF225M0QZC1 329 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 O00370 1275 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 CCP110O43303 1012 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 HCRTO43612 131 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 MICAL2O94851 1124 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ADH1AP07327 375 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 MMEP08473 750 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 PLEKP08567 350 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 CCDC175P0C221 793 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 SETSIPP0DME0 302 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 CTSAP10619 480 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 IGFBP6P24592 240 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 LMO2P25791 158 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ERVK-21P61565 698 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 KRT83P78385 493 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 SMAD3P84022 425 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 TAP1Q03518 808 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 BST2Q10589 180 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 SMARCB1Q12824 385 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 GPM6BQ13491 265 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 PTPN14Q15678 1187 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 PTPROQ16827 1216 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 HGSNATQ68CP4 663 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 CD300LGQ6UXG3 332 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 LIMS2Q7Z4I7 341 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 KIAA1328Q86T90 577 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 FAM35AQ86V20 835 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 GPR65Q8IYL9 337 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 C1orf131Q8NDD1 294 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 OR10T2Q8NGX3 314 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 SLC2A14Q8TDB8 520 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 WHAMMQ8TF30 809 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ZNF606Q8WXB4 792 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 CYFIP2Q96F07 1278 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 FUBP3Q96I24 572 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 SEPT5Q99719 369 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ZCWPW1Q9H0M4 648 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ALG13Q9NP73 1137 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 NGRNQ9NPE2 291 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 DMAP1Q9NPF5 467 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ACP6Q9NPH0 428 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ST7Q9NRC1 585 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 SPTLC3Q9NUV7 552 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 ADAMTS1Q9UHI8 967 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 FCF1Q9Y324 198 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 PCDHB5Q9Y5E4 795 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 BACE2Q9Y5Z0 518 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 CDY1Q9Y6F8 540 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 DNAH12Q6ZR08 3092 aa6.97□□□□□ -1.29
CTDNEP1-204ENST00000570484 TMCO5BA8MYB1 307 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 H3BNC9 293 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 PRRG1O14668 218 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZSCAN12O43309 604 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 NDUFA10O95299 355 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 GLUD1P00367 558 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CALB1P05937 261 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 OR4Q2P0C623 313 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 LINC00271P0C7V0 271 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 NPR3P17342 541 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 DESP17661 470 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 RPL17P18621 184 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ELF1P32519 619 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 OR1D2P34982 312 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 GRIK1P39086 918 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CCZ1BP86790 482 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms