RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 TRPM5Q9NZQ8 1165 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 GMEB2Q9UKD1 530 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 ATP8B3O60423 1300 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 CACNA1IQ9P0X4 2223 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 SHISA7A6NL88 538 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CALUO43852 315 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 ATG13O75143 517 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 TACC1O75410 805 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 ABL1P00519 1130 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 MYL1P05976 194 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 FAM163BP0C2L3 166 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 P4HA1P13674 534 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PFKFB1P16118 471 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PTPN1P18031 435 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 HDCP19113 662 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CMA1P23946 247 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 SYKP43405 635 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 MYL6P60660 151 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 SATB1Q01826 763 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 FAM160A1Q05DH4 1040 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 EHHADHQ08426 723 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 IFRD2Q12894 506 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 NR1H3Q13133 447 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 ZNF268Q14587 947 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 MTF1Q14872 753 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PDGFRLQ15198 375 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CCDC142Q17RM4 750 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 ZNF667Q5HYK9 610 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 TDRD10Q5VZ19 366 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 TRIM68Q6AZZ1 485 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PRR23BQ6ZRT6 265 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 TMEM150AQ86TG1 271 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 C12orf56Q8IXR9 622 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 SYNPOQ8N3V7 929 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CPA6Q8N4T0 437 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 DCLK2Q8N568 766 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PCED1BQ96HM7 432 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 SPATA17Q96L03 361 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 MYRFLQ96LU7 910 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CEP295NLQ96MC4 621 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CYP2S1Q96SQ9 504 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PKMYT1Q99640 499 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CRTAC1Q9NQ79 661 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 DUS2Q9NX74 493 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 SMG5Q9UPR3 1016 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 CCL26Q9Y258 94 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 FRMD4BQ9Y2L6 1034 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 COL4A2P08572 1712 aa9.53□□□□□ -0.88
NPLOC4-204ENST00000570324 PDXKO00764 312 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 RPN1P04843 607 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 PTPRZ1P23471 2315 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 PPP3CCP48454 512 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 CASP4P49662 377 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 FOXK2Q01167 660 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 STK4Q13043 487 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF699Q32M78 642 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 CEP135Q66GS9 1140 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 HEATR6Q6AI08 1181 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 TXNDC11Q6PKC3 985 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 CEP68Q76N32 757 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 LIMS2Q7Z4I7 341 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 FANCMQ8IYD8 2048 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF687Q8N1G0 1237 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 ARL14EPQ8N8R7 260 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 ATP2A3Q93084 1043 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 TNIP3Q96KP6 325 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 SLITRK1Q96PX8 696 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 FAM83CQ9BQN1 747 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 IMPG2Q9BZV3 1241 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 ELOVL4Q9GZR5 314 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 SCAND2PQ9GZW5 306 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 EPC1Q9H2F5 836 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 KIF26AQ9ULI4 1882 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 USP18Q9UMW8 372 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 SLC8A2Q9UPR5 921 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 DENND4CQ5VZ89 1909 aa9.52□□□□□ -0.89
NPLOC4-204ENST00000570324 C2orf78A6NCI8 922 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 GOLGA6L4A6NEF3 574 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 LRRIQ3A6PVS8 624 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 CHURC1-FNTBB4DL54 471 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 F8VP50 259 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 KLRC4O43908 158 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 LILRB5O75023 590 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 TADA3O75528 432 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 RTN3O95197 1032 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 NR3C1P04150 777 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 KRT13P13646 458 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 ARSAP15289 507 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 DRD1P21728 446 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 SDHBP21912 280 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 CNR2P34972 360 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 FNTBP49356 437 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms