RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 LPIN1Q14693 890 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 CDC37Q16543 378 aaPredicted RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 ATP13A4Q4VNC1 1196 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 RRP12Q5JTH9 1297 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 CES5AQ6NT32 575 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 RTN4RL1Q86UN2 441 aaPredicted RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 DCP2Q8IU60 420 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 RBM12BQ8IXT5 1001 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 ADGRF4Q8IZF3 695 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 NETO2Q8NC67 525 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 NECTIN4Q96NY8 510 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 CEP89Q96ST8 783 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 RTP3Q9BQQ7 232 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 PDCD2LQ9BRP1 358 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 SMOC1Q9H4F8 434 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 TNFRSF12AQ9NP84 129 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 KLHL42Q9P2K6 505 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 ZNF215Q9UL58 517 aaPredicted RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 DDX19BQ9UMR2 479 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 FAM186AA6NE01 2351 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 RIF1Q5UIP0 2472 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 TTC3P53804 2025 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 SGSM2O43147 1006 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 DBHP09172 617 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 GOLGA8HP0CJ92 632 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 PCP11498 1178 aaKnown RBP6.81□□□□□ -1.32
UBFD1-209ENST00000569919 SDHBP21912 280 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 UBA1P22314 1058 aaKnown RBP6.81□□□□□ -1.32
UBFD1-209ENST00000569919 CCND2P30279 289 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 AFMP43652 599 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 GHRHRQ02643 423 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 TRAF1Q13077 416 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 KCNC3Q14003 757 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 PGM5Q15124 567 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 ANGPT1Q15389 498 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 QRICH1Q2TAL8 776 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 FIGNQ5HY92 759 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 FBXO47Q5MNV8 452 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 SPOUT1Q5T280 376 aaKnown RBP6.81□□□□□ -1.32
UBFD1-209ENST00000569919 CPZQ66K79 652 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 SYCE2Q6PIF2 218 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 TSHZ1Q6ZSZ6 1077 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 C11orf74Q86VG3 221 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 DGKHQ86XP1 1220 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 NOSTRINQ8IVI9 506 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 KIAA2013Q8IYS2 634 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 NLGN4XQ8N0W4 816 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 COG1Q8WTW3 980 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 SEC14L1Q92503 715 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 AMNQ9BXJ7 453 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 MYOTQ9UBF9 498 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 LZTS1Q9Y250 596 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 NUB1Q9Y5A7 615 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 MYO10Q9HD67 2058 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 C5orf42Q9H799 3197 aa6.81□□□□□ -1.32
UBFD1-209ENST00000569919 CCDC171Q6TFL3 1326 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 ATG2AQ2TAZ0 1938 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 ZC3H12DA2A288 527 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 M0QZ92 97 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 SCDO00767 359 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 DVL2O14641 736 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 DHX16O60231 1041 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 CLASP2O75122 1294 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 STAM2O75886 525 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 FGF18O76093 207 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 S100BP04271 92 aaPredicted RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 CYBBP04839 570 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 SCG2P13521 617 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 SLC9A1P19634 815 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 AOC1P19801 751 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 MTHFRP42898 656 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 NT5C2P49902 561 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 GP2P55259 537 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 MGAT3Q09327 533 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 MTMR1Q13613 665 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 ZNF174Q15697 407 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 PAN2Q504Q3 1202 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 ASPRV1Q53RT3 343 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 PAQR3Q6TCH7 311 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 METTL7BQ6UX53 244 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 MFSD6Q6ZSS7 791 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 CCDC105Q8IYK2 499 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 THNSL1Q8IYQ7 743 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 ZDHHC14Q8IZN3 488 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 VN1R2Q8NFZ6 395 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 LMBR1Q8WVP7 490 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 CASP10Q92851 521 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 TNPO1Q92973 898 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 BORCS6Q96GS4 357 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 GPR20Q99678 358 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 TRIM8Q9BZR9 551 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 ADAM7Q9H2U9 754 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 VAT1LQ9HCJ6 419 aa6.8□□□□□ -1.32
UBFD1-209ENST00000569919 NGRNQ9NPE2 291 aaKnown RBP6.8□□□□□ -1.32
UBFD1-209ENST00000569919 DLL3Q9NYJ7 618 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms