RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 ARL4AP40617 200 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 GABRB2P47870 512 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 RNASE9P60153 205 aaKnown RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 RNASELQ05823 741 aaKnown RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 BEND6Q5SZJ8 279 aaPredicted RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 MRPL10Q7Z7H8 261 aaKnown RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 PSTKQ8IV42 348 aaKnown RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 ARHGAP18Q8N392 663 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 SENP6Q9GZR1 1112 aaPredicted RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 LRRC19Q9H756 370 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 SIX4Q9UIU6 781 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 TMEM59LQ9UK28 342 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 PIRO00625 290 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 CAPN9O14815 690 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 F9P00740 461 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 HOXA11P31270 313 aaPredicted RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 TUSC3Q13454 348 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 TFDP3Q5H9I0 405 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 ACBD5Q5T8D3 534 aaPredicted RBP6.34□□□□□ -1.39
CYLD-216ENST00000569891 FAM228AQ86W67 206 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 MREGQ8N565 214 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 SLC4A11Q8NBS3 891 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 RSAD2Q8WXG1 361 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 COLEC11Q9BWP8 271 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 SMYD3Q9H7B4 428 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 RNF186Q9NXI6 227 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 WHRNQ9P202 907 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 STK39Q9UEW8 545 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 L1RE1Q9UN81 338 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 PTPRJQ12913 1337 aa6.34□□□□□ -1.39
CYLD-216ENST00000569891 DCDC2CA8MYV0 355 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 ADAMTS4O75173 837 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 CTSHP09668 335 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 TYMPP19971 482 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 COILP38432 576 aaPredicted RBP6.34□□□□□ -1.4
CYLD-216ENST00000569891 SARNPP82979 210 aaKnown RBP6.34□□□□□ -1.4
CYLD-216ENST00000569891 SLC6A3Q01959 620 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 NFE2Q16621 373 aaPredicted RBP6.34□□□□□ -1.4
CYLD-216ENST00000569891 CYP1B1Q16678 543 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 DENND2CQ68D51 928 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 DCLRE1AQ6PJP8 1040 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 LEKR1Q6ZMV7 388 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 CD99L2Q8TCZ2 262 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 TEKT4Q8WW24 435 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 SLCO2A1Q92959 643 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 SNF8Q96H20 258 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 TTC25Q96NG3 672 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 AP1M1Q9BXS5 423 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 UBXN6Q9BZV1 441 aa6.34□□□□□ -1.4
CYLD-216ENST00000569891 NXF3Q9H4D5 531 aaKnown RBP6.34□□□□□ -1.4
CYLD-216ENST00000569891 ZNF487B1APH4 448 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 H7C4K7 107 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 XPO1O14980 1071 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 EFCAB14O75071 495 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 PDGFRAP16234 1089 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 ZNF143P52747 638 aaPredicted RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 ZBTB6Q15916 424 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 SLC24A5Q71RS6 500 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 MS4A14Q96JA4 679 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 CWC15Q9P013 229 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 ZNF148Q9UQR1 794 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 A0A0U1RQF3 1178 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 DPYSL4O14531 572 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 RAD51CO43502 376 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 GDF6Q6KF10 455 aaPredicted RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 DRICH1Q6PGQ1 229 aaPredicted RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 FAM76AQ8TAV0 307 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 P3H4Q92791 437 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 MCRS1Q96EZ8 462 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 ELOVL4Q9GZR5 314 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.33□□□□□ -1.4
CYLD-216ENST00000569891 DDX47Q9H0S4 455 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 ELAC1Q9H777 363 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 ERVK-5Q9HDB9 667 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 GABRQQ9UN88 632 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 DRG1Q9Y295 367 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 ARVCFO00192 962 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 ADCY6O43306 1168 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 CSDE1O75534 798 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 INHAP05111 366 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 SELPP16109 830 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 FGFR4P22455 802 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 STIP1P31948 543 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 ADCY8P40145 1251 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 ALKAL1Q6UXT8 129 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 TRMT10CQ7L0Y3 403 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 JAMLQ86YT9 394 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 RFX6Q8HWS3 928 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 SMARCD1Q96GM5 515 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 PPP1R2P1Q96PQ5 205 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 HNRNPABQ99729 332 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 EIF2AQ9BY44 585 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 METTL5Q9NRN9 209 aaKnown RBP6.33□□□□□ -1.4
CYLD-216ENST00000569891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.33□□□□□ -1.4
CYLD-216ENST00000569891 PADI3Q9ULW8 664 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 PCDHB7Q9Y5E2 793 aa6.33□□□□□ -1.4
CYLD-216ENST00000569891 GOLGA6CA6NDK9 693 aa6.32□□□□□ -1.4
CYLD-216ENST00000569891 H3BRJ5 948 aa6.32□□□□□ -1.4
CYLD-216ENST00000569891 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms