RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 TFAP2BQ92481 460 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 C16orf70Q9BSU1 422 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 CENPHQ9H3R5 247 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 TXNRD2Q9NNW7 524 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 MKS1Q9NXB0 559 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 PAK5Q9P286 719 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 PSMC3IPQ9P2W1 217 aaPredicted RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 UBQLN1Q9UMX0 589 aaKnown RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 R3HDM2Q9Y2K5 976 aaKnown RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 IVNS1ABPQ9Y6Y0 642 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 COL4A4P53420 1690 aaPredicted RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 MBLAC1A4D2B0 266 aaPredicted RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 SUN1O94901 812 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 FGFR4P22455 802 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 NOMO1Q15155 1222 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 P3H1Q32P28 736 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 EEF1DP3Q658K8 133 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 SLC27A1Q6PCB7 646 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 ADAT2Q7Z6V5 191 aaKnown RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 TMEM110Q86TL2 294 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 CDKL3Q8IVW4 592 aaPredicted RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 MAML1Q92585 1016 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 RBM15Q96T37 977 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 SELENOSQ9BQE4 189 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 KATNAL1Q9BW62 490 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 ZNF148Q9UQR1 794 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 GPR25O00155 361 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 TRDMT1O14717 391 aaKnown RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 TM9SF1O15321 606 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 LRCH4O75427 683 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 GJB6O95452 261 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 MMP3P08254 477 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 OLFML2BQ68BL8 750 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 NOTUMQ6P988 496 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 ALKAL1Q6UXT8 129 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 HACE1Q8IYU2 909 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 HSFY1Q96LI6 401 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 ELOVL4Q9GZR5 314 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 ADAMTS10Q9H324 1103 aa8.26□□□□□ -1.09
LINC00559-201ENST00000569476 RPL26L1Q9UNX3 145 aaKnown RBP8.26□□□□□ -1.09
LINC00559-201ENST00000569476 C2CD4BA6NLJ0 364 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 DDNO94850 711 aaPredicted RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 ALADP13716 330 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CHKAP35790 457 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 KCNJ1P48048 391 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 NKX3-2P78367 333 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RNASELQ05823 741 aaKnown RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 GRIK4Q16099 956 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 SLC10A6Q3KNW5 377 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 ANKRD20A8PQ5CZ79 823 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 PRAMEF18Q5VWM3 479 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 PLEKHH3Q7Z736 793 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RPAINQ86UA6 219 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CRYBG2Q8N1P7 616 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 NAT8LQ8N9F0 302 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 EPS8L3Q8TE67 593 aaKnown RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CCT6BQ92526 530 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CENPIQ92674 756 aaPredicted RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 HINFPQ9BQA5 517 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 PPANQ9NQ55 473 aaKnown RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 ZNF180Q9UJW8 692 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 LRRD1A4D1F6 860 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 FAM47DPA6NHR8 397 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CXCL8P10145 99 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CD58P19256 250 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 OGDHQ02218 1023 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 FRG1Q14331 258 aaKnown RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 SLC9A4Q6AI14 798 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 VSTM1Q6UX27 236 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 TRABD2AQ86V40 505 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RAB3IL1Q8TBN0 382 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 TUBB6Q9BUF5 446 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 SYNCQ9H7C4 482 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 DNPEPQ9ULA0 475 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 NFICP08651 508 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 TPSB2P20231 275 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 STX2P32856 288 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RPL7AP62424 266 aaKnown RBP8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CDK16Q00536 496 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 SLC6A3Q01959 620 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RIPK1Q13546 671 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 TPSAB1Q15661 275 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 Q3C1V9 767 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CCDC38Q502W7 563 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 CCNJLQ8IV13 435 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 TRIM42Q8IWZ5 723 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 SCML4Q8N228 414 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 LRRC71Q8N4P6 559 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 TOP6BLQ8N6T0 577 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RSAD2Q8WXG1 361 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 NLRP4Q96MN2 994 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 HERPUD2Q9BSE4 406 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 ACSS3Q9H6R3 686 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 RRN3Q9NYV6 651 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 SLC12A4Q9UP95 1085 aa8.25□□□□□ -1.09
LINC00559-201ENST00000569476 USTQ9Y2C2 406 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms