RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 KCNK16Q96T55 309 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 MKNK1Q9BUB5 465 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 LRRC3Q9BY71 257 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 IGSF9Q9P2J2 1179 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 PES1O00541 588 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 TRIM66O15016 1216 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 SLC16A3O15427 465 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 STX10O60499 249 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 CD72P21854 359 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 FMO5P49326 533 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 MAP3K7CLP57077 242 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 NLRP12P59046 1061 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 RPL10AP62906 217 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 SIGLEC14Q08ET2 396 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 ARHGAP15Q53QZ3 475 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 TXNDC8Q6A555 127 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 TMEM92Q6UXU6 159 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 RRAGAQ7L523 313 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 TRIML1Q8N9V2 468 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 SLC2A14Q8TDB8 520 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 TMEM174Q8WUU8 243 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 SLC35C1Q96A29 364 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 RSPRY1Q96DX4 576 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 ZFYVE19Q96K21 471 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 HEXIM2Q96MH2 286 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 MED15Q96RN5 788 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 CYP2S1Q96SQ9 504 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 ELOVL4Q9GZR5 314 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 NIF3L1Q9GZT8 377 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 ZFP14Q9HCL3 533 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 KRT82Q9NSB4 513 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 TMEM30AQ9NV96 361 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 MAFFQ9ULX9 164 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 DUSP12Q9UNI6 340 aa9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 ZNF638Q14966 1978 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-210ENST00000569394 NCANO14594 1321 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 FAM170AA1A519 330 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 HEPACAM2A8MVW5 462 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 GPR37L1O60883 481 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 AP1G2O75843 785 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 BEST1O76090 585 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 POU2F2P09086 479 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CSH1P0DML2 217 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CSH2P0DML3 217 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 HMGA1P17096 107 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 GDI1P31150 447 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 GTF2H1P32780 548 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 PPP1R2P41236 205 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 MTIF2P46199 727 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 VCPP55072 806 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 APBA1Q02410 837 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 SMARCB1Q12824 385 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 DENND5BQ6ZUT9 1274 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 MTSS1LQ765P7 747 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 FRMD5Q7Z6J6 570 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 FAM35AQ86V20 835 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 ARID3BQ8IVW6 561 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 ZC3H3Q8IXZ2 948 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 YAF2Q8IY57 180 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 UBALD2Q8IYN6 164 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 PPM1KQ8N3J5 372 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 TAF4BQ92750 862 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 SMARCD2Q92925 531 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 KAT5Q92993 513 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CYFIP2Q96F07 1278 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 TNIP3Q96KP6 325 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CNOT6LQ96LI5 555 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CEP63Q96MT8 703 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 ASB16Q96NS5 453 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CRACR2AQ9BSW2 395 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 SLC46A2Q9BY10 475 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 GTPBP4Q9BZE4 634 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 BRD9Q9H8M2 597 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 VRTNQ9H8Y1 702 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 METTL14Q9HCE5 456 aaKnown RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 CHORDC1Q9UHD1 332 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 RWDD2AQ9UIY3 292 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 ASB3Q9Y575 518 aa9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.59□□□□□ -0.87
GTF3C1-210ENST00000569394 TECTAO75443 2155 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 KRBA1A5PL33 1030 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 C2orf78A6NCI8 922 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 PRR33A8MZF0 331 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 ANHXE9PGG2 379 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 PAPLNO95428 1278 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 PRAMEF12O95522 483 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 AFPP02771 609 aaKnown RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CD19P15391 556 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 FCARP24071 287 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CDC25CP30307 473 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 EPHA5P54756 1037 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms