RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 FAM163BP0C2L3 166 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 CSH1P0DML2 217 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 CSH2P0DML3 217 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 CDK11BP21127 795 aaKnown RBP15.43■□□□□ 0.06
COMMD4-225ENST00000569245 PIK3CAP42336 1068 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 CFAP221Q4G0U5 840 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 SLC44A4Q53GD3 710 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 MDH1BQ5I0G3 518 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 CWF19L1Q69YN2 538 aaKnown RBP15.43■□□□□ 0.06
COMMD4-225ENST00000569245 SCARA5Q6ZMJ2 495 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 YAF2Q8IY57 180 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 STKLD1Q8NE28 680 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 MYCBPAPQ8TBZ2 947 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 MYLPFQ96A32 169 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 E2F7Q96AV8 911 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 ELMO3Q96BJ8 720 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 FUBP3Q96I24 572 aaKnown RBP eCLIP15.43■□□□□ 0.06
COMMD4-225ENST00000569245 CRTAC1Q9NQ79 661 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
COMMD4-225ENST00000569245 DOCK8Q8NF50 2099 aa15.43■□□□□ 0.06
COMMD4-225ENST00000569245 KCNJ18B7U540 433 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 SLC16A3O15427 465 aaKnown RBP15.42■□□□□ 0.06
COMMD4-225ENST00000569245 PI15O43692 258 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 VNN1O95497 513 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 TRIM49P0CI25 452 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 TRIM49CP0CI26 452 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 ATP1A3P13637 1013 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 PSMC3P17980 439 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 PTPN1P18031 435 aaKnown RBP15.42■□□□□ 0.06
COMMD4-225ENST00000569245 AOC1P19801 751 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 BDNFP23560 247 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 ANXA13P27216 316 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 GDI1P31150 447 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 GRIK1P39086 918 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 RAP1GAPP47736 663 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 GCLMP48507 274 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 PTPN5P54829 565 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 CDH8P55286 799 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 MARSP56192 900 aaKnown RBP15.42■□□□□ 0.06
COMMD4-225ENST00000569245 CYP4F8P98187 520 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 KCNJ12Q14500 433 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 ZACNQ401N2 412 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 VITQ6UXI7 678 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-225ENST00000569245 PRSS33Q8NF86 280 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 MKNK1Q9BUB5 465 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 TASP1Q9H6P5 420 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 SMYD3Q9H7B4 428 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 TRPV4Q9HBA0 871 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 IL21Q9HBE4 155 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.42■□□□□ 0.06
COMMD4-225ENST00000569245 NOTCH4Q99466 2003 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 TSC2P49815 1807 aa15.42■□□□□ 0.06
COMMD4-225ENST00000569245 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 HEPACAM2A8MVW5 462 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 ZNF263O14978 683 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 AP5Z1O43299 807 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 EPB41P11171 864 aaKnown RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 HMGA1P17096 107 aaKnown RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 MAGEA11P43364 429 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 NUBP1P53384 320 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 FANCCQ00597 558 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 MLF2Q15773 248 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 PHLDB3Q6NSJ2 640 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 APTXQ7Z2E3 356 aaKnown RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 CCDC150Q8NCX0 1101 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 ANKRD20A12PQ8NF67 263 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 DEPDC1BQ8WUY9 529 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 MRPS31Q92665 395 aaKnown RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 TAF4BQ92750 862 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 IRF7Q92985 503 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 CNOT6LQ96LI5 555 aaKnown RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 IMPG2Q9BZV3 1241 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 DPEP3Q9H4B8 488 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 VRTNQ9H8Y1 702 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 UXTQ9UBK9 157 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-225ENST00000569245 SIT1Q9Y3P8 196 aa15.41■□□□□ 0.06
COMMD4-225ENST00000569245 GALR2O43603 387 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-225ENST00000569245 STARD6P59095 220 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 MCCD1P59942 119 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-225ENST00000569245 PRKCQQ04759 706 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 HSP90AA4PQ58FG1 418 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 VSTM1Q6UX27 236 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 MFSD6LQ8IWD5 586 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 MAB21L3Q8N8X9 362 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 B3GALNT2Q8NCR0 500 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 MED10Q9BTT4 135 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 SLC46A2Q9BY10 475 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 FOXQ1Q9C009 403 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 METTL14Q9HCE5 456 aaKnown RBP15.4■□□□□ 0.06
COMMD4-225ENST00000569245 NME7Q9Y5B8 376 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 MUC6Q6W4X9 2439 aa15.4■□□□□ 0.06
COMMD4-225ENST00000569245 TRIM66O15016 1216 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms