RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 LIPAP38571 399 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 SATB1Q01826 763 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 E2F2Q14209 437 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 CEP78Q5JTW2 689 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 C8orf58Q8NAV2 365 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 MTFMTQ96DP5 389 aaKnown RBP4.33□□□□□ -1.72
UBR1-209ENST00000569243 CDK5RAP3Q96JB5 506 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 ASB2Q96Q27 587 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 THAP7Q9BT49 309 aaPredicted RBP4.33□□□□□ -1.72
UBR1-209ENST00000569243 ASPSCR1Q9BZE9 553 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 BRINP2Q9C0B6 783 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 GLOD4Q9HC38 313 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 GABRQQ9UN88 632 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 ADAMTS5Q9UNA0 930 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 SHOC2Q9UQ13 582 aa4.33□□□□□ -1.72
UBR1-209ENST00000569243 A1L4Q6 167 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 POC1B-GALNT4F8VUJ3 575 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 TOP3BO95985 862 aaKnown RBP4.32□□□□□ -1.72
UBR1-209ENST00000569243 PDHA1P08559 390 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 CHRM5P08912 532 aaPredicted RBP4.32□□□□□ -1.72
UBR1-209ENST00000569243 NHLRC4P0CG21 123 aaPredicted RBP4.32□□□□□ -1.72
UBR1-209ENST00000569243 CYP2D6P10635 497 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 XRCC6P12956 609 aaKnown RBP eCLIP4.32□□□□□ -1.72
UBR1-209ENST00000569243 WNT3P56703 355 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 DAZAP2Q15038 168 aaPredicted RBP4.32□□□□□ -1.72
UBR1-209ENST00000569243 TRIP6Q15654 476 aaKnown RBP4.32□□□□□ -1.72
UBR1-209ENST00000569243 TWIST1Q15672 202 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 TRIM72Q6ZMU5 477 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 GALNT4Q8N4A0 578 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 LRRC71Q8N4P6 559 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 PIGOQ8TEQ8 1089 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 ATG4AQ8WYN0 398 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 RSPRY1Q96DX4 576 aa4.32□□□□□ -1.72
UBR1-209ENST00000569243 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
UBR1-209ENST00000569243 AHSGP02765 367 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 MPGP29372 298 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 HYAL1Q12794 435 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 PLS1Q14651 629 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 TMEM63BQ5T3F8 832 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 MEPCEQ7L2J0 689 aaKnown RBP4.31□□□□□ -1.72
UBR1-209ENST00000569243 CHSY1Q86X52 802 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 ABHD11Q8NFV4 315 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 ZCRB1Q8TBF4 217 aaKnown RBP4.31□□□□□ -1.72
UBR1-209ENST00000569243 SOCS4Q8WXH5 440 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 DAZAP1Q96EP5 407 aaKnown RBP4.31□□□□□ -1.72
UBR1-209ENST00000569243 MVB12AQ96EY5 273 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 HMCESQ96FZ2 354 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 SLC35A4Q96G79 324 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 SERTAD3Q9UJW9 196 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 MED16Q9Y2X0 877 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 PCDHA1Q9Y5I3 950 aa4.31□□□□□ -1.72
UBR1-209ENST00000569243 H3BUI4 141 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 SMIM22K7EJ46 135 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 FESP07332 822 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 NR4A2P43354 598 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 MMP13P45452 471 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 PLCD1P51178 756 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 PDE1AP54750 535 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 TPTEP56180 551 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 SOX8P57073 446 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 CYP4F2P78329 520 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 EXOSC9Q06265 439 aaKnown RBP4.3□□□□□ -1.72
UBR1-209ENST00000569243 FAM50AQ14320 339 aaKnown RBP4.3□□□□□ -1.72
UBR1-209ENST00000569243 SUPT20HL1Q3ZLR7 823 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 Q6ZWC4 215 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 GLG1Q92896 1179 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 CHMP4CQ96CF2 233 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 HSPBAP1Q96EW2 488 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 SNX18Q96RF0 628 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 TTYH3Q9C0H2 523 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 SPRTNQ9H040 489 aaPredicted RBP4.3□□□□□ -1.72
UBR1-209ENST00000569243 SARS2Q9NP81 518 aaKnown RBP4.3□□□□□ -1.72
UBR1-209ENST00000569243 MDFICQ9P1T7 246 aa4.3□□□□□ -1.72
UBR1-209ENST00000569243 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
UBR1-209ENST00000569243 SMIM35A0A1B0GVV1 85 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 UBE2Q2LH0YL09 131 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 USP1O94782 785 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 UNC5CO95185 931 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 IL33O95760 270 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 GRPP07492 148 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 MYCLP12524 364 aaPredicted RBP4.29□□□□□ -1.72
UBR1-209ENST00000569243 ENGP17813 658 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 HDCP19113 662 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 SFPQP23246 707 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBR1-209ENST00000569243 PDE6CP51160 858 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 LILRA4P59901 499 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 CERKLQ49MI3 558 aaPredicted RBP4.29□□□□□ -1.72
UBR1-209ENST00000569243 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 PXDC1Q5TGL8 231 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
UBR1-209ENST00000569243 Q6ZTC4 211 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 GAS2L3Q86XJ1 694 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 PNLDC1Q8NA58 520 aaKnown RBP4.29□□□□□ -1.72
UBR1-209ENST00000569243 CYP2W1Q8TAV3 490 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 C1GALT1C1Q96EU7 318 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 MESP1Q9BRJ9 268 aa4.29□□□□□ -1.72
UBR1-209ENST00000569243 PCDH12Q9NPG4 1184 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms