RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ATF6P18850 670 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 KCNA5P22460 613 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 BRD2P25440 801 aaKnown RBP17.75■□□□□ 0.43
COMMD4-224ENST00000568877 ZNF75DP51815 510 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 CACNA2D1P54289 1103 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 EPHB3P54753 998 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 BPIFB4P59827 614 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 STILQ15468 1287 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 CNGA2Q16280 664 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 DDR2Q16832 855 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 SLC47A2Q86VL8 602 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 BAP1Q92560 729 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 ZNF707Q96C28 371 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-224ENST00000568877 APOL5Q9BWW9 433 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 S1PR5Q9H228 398 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 KRT82Q9NSB4 513 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 TSPAN16Q9UKR8 245 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 MYO6Q9UM54 1294 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 COG5Q9UP83 839 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.75■□□□□ 0.43
COMMD4-224ENST00000568877 EYSQ5T1H1 3165 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 A0A1W2PQJ5 194 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 F8VP50 259 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 H3BQ06 376 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-224ENST00000568877 MED7O43513 233 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 XYLBO75191 536 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 GPR15P49685 360 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 ITIH3Q06033 890 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 CLUL1Q15846 466 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 GOLGA7BQ2TAP0 167 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 LCLAT1Q6UWP7 414 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 CYP26C1Q6V0L0 522 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 ANKRD52Q8NB46 1076 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 C8orf48Q96LL4 319 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 KCNK16Q96T55 309 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 SMOQ99835 787 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 DUSP16Q9BY84 665 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 ADAM7Q9H2U9 754 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 CSNK1G1Q9HCP0 422 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-224ENST00000568877 TMEM30AQ9NV96 361 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 HESX1Q9UBX0 185 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 CD207Q9UJ71 328 aa17.74■□□□□ 0.43
COMMD4-224ENST00000568877 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.74■□□□□ 0.43
COMMD4-224ENST00000568877 THAP12O43422 761 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 BEST1O76090 585 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 CYP11B1P15538 503 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 NPR3P17342 541 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 ANXA13P27216 316 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 MAP3K7CLP57077 242 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 VEPH1Q14D04 833 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 SDHAF4Q5VUM1 108 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 CES5AQ6NT32 575 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 CLEC20AQ6ZU45 233 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 TTC30AQ86WT1 665 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 ELMOD1Q8N336 334 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 SMRP1Q8NCR6 262 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 ZMIZ2Q8NF64 920 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 FEZF2Q8TBJ5 459 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 GPR152Q8TDT2 470 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 GIPC2Q8TF65 315 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 CPLX3Q8WVH0 158 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 SMG7Q92540 1137 aaKnown RBP17.73■□□□□ 0.43
COMMD4-224ENST00000568877 MRFAP1L1Q96HT8 127 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 SPATA17Q96L03 361 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 CEP295NLQ96MC4 621 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 ZNF512Q96ME7 567 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-224ENST00000568877 PIDD1Q9HB75 910 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 CAPN11Q9UMQ6 739 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 ASB3Q9Y575 518 aa17.73■□□□□ 0.43
COMMD4-224ENST00000568877 MTCL1Q9Y4B5 1905 aaKnown RBP17.72■□□□□ 0.43
COMMD4-224ENST00000568877 LRRC53A6NM62 1247 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 MICAL2O94851 1124 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 GYPCP04921 128 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 PDE6CP51160 858 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 BCAT1P54687 386 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 SLC8A3P57103 927 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 ARID5AQ03989 594 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 TRIM14Q14142 442 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 DNAJB7Q7Z6W7 309 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-224ENST00000568877 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 GPIHBP1Q8IV16 184 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 FMNL3Q8IVF7 1028 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 ZNF397Q8NF99 534 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-224ENST00000568877 UBA3Q8TBC4 463 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 PSMG2Q969U7 264 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
COMMD4-224ENST00000568877 LUC7L2Q9Y383 392 aaKnown RBP17.72■□□□□ 0.43
COMMD4-224ENST00000568877 GOLGA6L3A6NEY3 463 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 SLC38A8A6NNN8 435 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 M0QYV0 167 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 CCDC172P0C7W6 258 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 FERP16591 822 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 PTPN2P17706 415 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 SSTR3P32745 418 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-224ENST00000568877 ZBED6P86452 979 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 PDE4CQ08493 712 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 BST2Q10589 180 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms