RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ADAM33Q9BZ11 813 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 GCNT4Q9P109 453 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 DSEQ9UL01 958 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 DERAQ9Y315 318 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 C2CD2Q9Y426 696 aa15.97■□□□□ 0.15
USB1-214ENST00000568848 PTPRJQ12913 1337 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 SPAARA0A1B0GVQ0 90 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 H0YCG3 227 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 HYAL3O43820 417 aaPredicted RBP15.96■□□□□ 0.15
USB1-214ENST00000568848 RHOBTB1O94844 696 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 DDIT3P35638 169 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 CASP5P51878 434 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 TSPY1Q01534 308 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 FAM160A1Q05DH4 1040 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 KYAT1Q16773 422 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 SV2CQ496J9 727 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 RILPL1Q5EBL4 403 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 CYP2U1Q7Z449 544 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 CD302Q8IX05 232 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 TMEFF1Q8IYR6 380 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 OR2I1PQ8NGU4 316 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 CXorf38Q8TB03 319 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 C2orf15Q8WU43 125 aaKnown RBP15.96■□□□□ 0.15
USB1-214ENST00000568848 ZSCAN31Q96LW9 406 aaPredicted RBP15.96■□□□□ 0.15
USB1-214ENST00000568848 ASB7Q9H672 318 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 KIF9Q9HAQ2 790 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 TMEM74BQ9NUR3 256 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 SMPD4Q9NXE4 827 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 KCND2Q9NZV8 630 aa15.96■□□□□ 0.15
USB1-214ENST00000568848 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
USB1-214ENST00000568848 TNRC6BQ9UPQ9 1833 aaKnown RBP15.96■□□□□ 0.14
USB1-214ENST00000568848 CELSR3Q9NYQ7 3312 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 KRT19P08727 400 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 CSH1P0DML2 217 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 CSH2P0DML3 217 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 LMO2P25791 158 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 DDX6P26196 483 aaKnown RBP eCLIP15.95■□□□□ 0.14
USB1-214ENST00000568848 UBA7P41226 1012 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 PTGER3P43115 390 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 KDSRQ06136 332 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 ALLCQ8N6M5 410 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 GATA6Q92908 595 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 MYLPFQ96A32 169 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 CALML4Q96GE6 196 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 CCSER1Q9C0I3 900 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 PCIF1Q9H4Z3 704 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 TMEM9BQ9NQ34 198 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 EBF1Q9UH73 591 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 MBD1Q9UIS9 605 aaPredicted RBP15.95■□□□□ 0.14
USB1-214ENST00000568848 SIX4Q9UIU6 781 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 KLK13Q9UKR3 277 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 NME7Q9Y5B8 376 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 SNX9Q9Y5X1 595 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 STYXL1Q9Y6J8 313 aa15.95■□□□□ 0.14
USB1-214ENST00000568848 ANKRD11Q6UB99 2663 aaPredicted RBP15.95■□□□□ 0.14
USB1-214ENST00000568848 PI4KAP42356 2102 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 NBEAQ8NFP9 2946 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 SGK1O00141 431 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 KHNYNO15037 678 aaKnown RBP15.94■□□□□ 0.14
USB1-214ENST00000568848 USP17L7P0C7H9 530 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 CHRM1P11229 460 aaPredicted RBP15.94■□□□□ 0.14
USB1-214ENST00000568848 GJB2P29033 226 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 CACNA2D1P54289 1103 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 ZNF268Q14587 947 aaPredicted RBP15.94■□□□□ 0.14
USB1-214ENST00000568848 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 SPATA2LQ8IUW3 424 aaPredicted RBP15.94■□□□□ 0.14
USB1-214ENST00000568848 KCNN1Q92952 543 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 EPSTI1Q96J88 318 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 FNBP1Q96RU3 617 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 CBWD1Q9BRT8 395 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 MTMR12Q9C0I1 747 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 PDE11AQ9HCR9 933 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 CRTAC1Q9NQ79 661 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 KCNG1Q9UIX4 513 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 FREM2Q5SZK8 3169 aa15.94■□□□□ 0.14
USB1-214ENST00000568848 MYO18AQ92614 2054 aaKnown RBP15.93■□□□□ 0.14
USB1-214ENST00000568848 SRRM3A6NNA2 597 aaPredicted RBP15.93■□□□□ 0.14
USB1-214ENST00000568848 LEFTY2O00292 366 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 PPP1R37O75864 691 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 KLF8O95600 359 aaPredicted RBP15.93■□□□□ 0.14
USB1-214ENST00000568848 CYP17A1P05093 508 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 HDCP19113 662 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 TIE1P35590 1138 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 FAM193AP78312 1265 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 IFRD2Q12894 506 aaPredicted RBP15.93■□□□□ 0.14
USB1-214ENST00000568848 DAB2IPQ5VWQ8 1189 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 ZNF720Q7Z2F6 126 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 RASSF3Q86WH2 238 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 ADGRF2Q8IZF7 708 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 CSGALNACT2Q8N6G5 542 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 TXNDC5Q8NBS9 432 aaKnown RBP15.93■□□□□ 0.14
USB1-214ENST00000568848 GLIS3Q8NEA6 775 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 ATP2A3Q93084 1043 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 ACDQ96AP0 544 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 ZNF560Q96MR9 790 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 RNF38Q9H0F5 515 aa15.93■□□□□ 0.14
USB1-214ENST00000568848 TMEM30AQ9NV96 361 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms