RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ZNF667Q5HYK9 610 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 TXNDC8Q6A555 127 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 C1orf228Q6PIY5 440 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 ZC3H14Q6PJT7 736 aaKnown RBP15.41■□□□□ 0.06
CMTM3-215ENST00000568477 ASCL5Q7RTU5 278 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 SPATA17Q96L03 361 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 CEP295NLQ96MC4 621 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 VRTNQ9H8Y1 702 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 KIF9Q9HAQ2 790 aa15.41■□□□□ 0.06
CMTM3-215ENST00000568477 EP300Q09472 2414 aaPredicted RBP15.41■□□□□ 0.06
CMTM3-215ENST00000568477 A8MXQ7 604 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 TADA3O75528 432 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 PTPN1P18031 435 aaKnown RBP15.4■□□□□ 0.06
CMTM3-215ENST00000568477 NR2F2P24468 414 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 CCNE1P24864 410 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 GRIK1P39086 918 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 DLG4P78352 724 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 NFIL3Q16649 462 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 ZNF687Q8N1G0 1237 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 GUF1Q8N442 669 aaKnown RBP15.4■□□□□ 0.06
CMTM3-215ENST00000568477 ZFYVE19Q96K21 471 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 SMYD3Q9H7B4 428 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 TRPC7Q9HCX4 862 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 TDP1Q9NUW8 608 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 FBXO4Q9UKT5 387 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 MAPK8IP1Q9UQF2 711 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 NME7Q9Y5B8 376 aa15.4■□□□□ 0.06
CMTM3-215ENST00000568477 TRIM66O15016 1216 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 MAPK13O15264 365 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 VNN1O95497 513 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 P4HA1P13674 534 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 RPL13P26373 211 aaKnown RBP15.39■□□□□ 0.05
CMTM3-215ENST00000568477 SOX9P48436 509 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 FZD5Q13467 585 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 ZNF268Q14587 947 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-215ENST00000568477 ZACNQ401N2 412 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 MAML2Q8IZL2 1156 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-215ENST00000568477 B3GALNT2Q8NCR0 500 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-215ENST00000568477 IER2Q9BTL4 223 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 ELOVL4Q9GZR5 314 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 CHRDQ9H2X0 955 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 SEMA4AQ9H3S1 761 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 DPEP3Q9H4B8 488 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 GTSE1Q9NYZ3 720 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 EHD2Q9NZN4 543 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 R4GN57 208 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 DENND4CQ5VZ89 1909 aa15.39■□□□□ 0.05
CMTM3-215ENST00000568477 TRAV19A0A0A6YYK7 116 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 F8VP50 259 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 IKBKBO14920 756 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 CKMP06732 381 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 KRT13P13646 458 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 CTHP32929 405 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 PIK3CAP42336 1068 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 VAMP7P51809 220 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 CSTF1Q05048 431 aaKnown RBP15.38■□□□□ 0.05
CMTM3-215ENST00000568477 LRRC32Q14392 662 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 SGSM1Q2NKQ1 1148 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 ITPRIPL2Q3MIP1 535 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 ZNF528Q3MIS6 628 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 CC2D1AQ6P1N0 951 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-215ENST00000568477 DENND5BQ6ZUT9 1274 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 INTS8Q75QN2 995 aaKnown RBP15.38■□□□□ 0.05
CMTM3-215ENST00000568477 SV2AQ7L0J3 742 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 RALGPS2Q86X27 583 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-215ENST00000568477 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-215ENST00000568477 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 TAF4BQ92750 862 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 C8orf48Q96LL4 319 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 GBP4Q96PP9 640 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 LMAN1LQ9HAT1 526 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 GKN1Q9NS71 199 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 RMND1Q9NWS8 449 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 ATP8B3O60423 1300 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 PATJQ8NI35 1801 aa15.38■□□□□ 0.05
CMTM3-215ENST00000568477 OBSL1O75147 1896 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 ZNF638Q14966 1978 aaKnown RBP15.37■□□□□ 0.05
CMTM3-215ENST00000568477 AKAP3O75969 853 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 USP17L7P0C7H9 530 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 PSMC2P35998 433 aaKnown RBP15.37■□□□□ 0.05
CMTM3-215ENST00000568477 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 CDH8P55286 799 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 FAM160A1Q05DH4 1040 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 TNK2Q07912 1038 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 MTAPQ13126 283 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 PNOCQ13519 176 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 C1orf220Q5T0J3 134 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 FAM186BQ8IYM0 893 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 ELMO3Q96BJ8 720 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 TNIP3Q96KP6 325 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 TTLL2Q9BWV7 592 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 B3GNT5Q9BYG0 378 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms