RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 PLEKHO2Q8TD55 490 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 CHFRQ96EP1 664 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 PAGE5Q96GU1 130 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 SLC22A12Q96S37 553 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 EBF3Q9H4W6 596 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 GCNT4Q9P109 453 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 CFAP54Q96N23 3096 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 EXOC3O60645 756 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 ARSAP15289 507 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 GNL1P36915 607 aaPredicted RBP20.2■□□□□ 0.82
SPSB3-210ENST00000568416 TNNC1P63316 161 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 FOXK2Q01167 660 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 CYP27A1Q02318 531 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 DMWDQ09019 674 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 STK4Q13043 487 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 USP4Q13107 963 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 PDGFRLQ15198 375 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 ZNF77Q15935 545 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 KIAA0895Q8NCT3 520 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 GOLGA5Q8TBA6 731 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 RMDN1Q96DB5 314 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 PCED1BQ96HM7 432 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 CYP2S1Q96SQ9 504 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 XYLT2Q9H1B5 865 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 SNX25Q9H3E2 840 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 TRPC7Q9HCX4 862 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 C2orf42Q9NWW7 574 aa20.2■□□□□ 0.82
SPSB3-210ENST00000568416 TRAV19A0A0A6YYK7 116 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 TRDMT1O14717 391 aaKnown RBP20.19■□□□□ 0.82
SPSB3-210ENST00000568416 PFKFB1P16118 471 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 ATICP31939 592 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 GRIK1P39086 918 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 CASP4P49662 377 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 MYL6P60660 151 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 MTF1Q14872 753 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 TMEM196Q5HYL7 178 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 MDH1BQ5I0G3 518 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 CC2D1AQ6P1N0 951 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-210ENST00000568416 ERMP1Q7Z2K6 904 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 ARL14EPQ8N8R7 260 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-210ENST00000568416 FSIP1Q8NA03 581 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 OR6B3Q8NGW1 331 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 TMEM174Q8WUU8 243 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 DMAC2Q9NW81 257 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 HPSEQ9Y251 543 aa20.19■□□□□ 0.82
SPSB3-210ENST00000568416 OBSL1O75147 1896 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 C2orf78A6NCI8 922 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 CHURC1-FNTBB4DL54 471 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 TRIM66O15016 1216 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 CKMP06732 381 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 PTPN1P18031 435 aaKnown RBP20.18■□□□□ 0.82
SPSB3-210ENST00000568416 CMA1P23946 247 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 FNTBP49356 437 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 USP46P62068 366 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 PSMD2Q13200 908 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 TRPC3Q13507 836 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 KMT5BQ4FZB7 885 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 FSTL4Q6MZW2 842 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 DENND5BQ6ZUT9 1274 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 GPR161Q8N6U8 529 aaKnown RBP20.18■□□□□ 0.82
SPSB3-210ENST00000568416 PARD3BQ8TEW8 1205 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
SPSB3-210ENST00000568416 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
SPSB3-210ENST00000568416 C8orf48Q96LL4 319 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 TTLL2Q9BWV7 592 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 DPEP3Q9H4B8 488 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 VRTNQ9H8Y1 702 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 EXOC1Q9NV70 894 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 ZDHHC9Q9Y397 364 aa20.18■□□□□ 0.82
SPSB3-210ENST00000568416 A0A1B0GVL5 298 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 LRRIQ3A6PVS8 624 aaPredicted RBP20.17■□□□□ 0.82
SPSB3-210ENST00000568416 TCF3P15923 654 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 ANXA13P27216 316 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 HOXA6P31267 233 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 AP3M2P53677 418 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 CLDN10P78369 228 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 TDRD10Q5VZ19 366 aaKnown RBP20.17■□□□□ 0.82
SPSB3-210ENST00000568416 LONP2Q86WA8 852 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 SLC9A9Q8IVB4 645 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 OSCP1Q8WVF1 389 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 KCTD10Q9H3F6 313 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 NXF1Q9UBU9 619 aaKnown RBP20.17■□□□□ 0.82
SPSB3-210ENST00000568416 USP25Q9UHP3 1055 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 FAM186AA6NE01 2351 aa20.17■□□□□ 0.82
SPSB3-210ENST00000568416 DENND4CQ5VZ89 1909 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 A8MXQ7 604 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 F8VP50 259 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 C4BPAP04003 597 aaKnown RBP20.16■□□□□ 0.82
SPSB3-210ENST00000568416 PFKLP17858 780 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 HDCP19113 662 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 TGM1P22735 817 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 HOXC13P31276 330 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 GJA4P35212 333 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 CACNA2D1P54289 1103 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 NOP14P78316 857 aaKnown RBP20.16■□□□□ 0.82
SPSB3-210ENST00000568416 AMPD2Q01433 879 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 GRSF1Q12849 480 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPSB3-210ENST00000568416 KCNB1Q14721 858 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms