RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 RTL10Q7L3V2 364 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 IRF2BP2Q7Z5L9 587 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 NOP9Q86U38 636 aaKnown RBP16.65■□□□□ 0.26
SPG7-218ENST00000568205 CNGA4Q8IV77 575 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 ANKRD52Q8NB46 1076 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 DNAJC7Q99615 494 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 TMEM30AQ9NV96 361 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 HESX1Q9UBX0 185 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 NOCTQ9UK39 431 aaKnown RBP16.65■□□□□ 0.26
SPG7-218ENST00000568205 INSL5Q9Y5Q6 135 aa16.65■□□□□ 0.26
SPG7-218ENST00000568205 M0QYV0 167 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 ZMYND10O75800 440 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 SOAT2O75908 522 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 GLP2RO95838 553 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 NPR3P17342 541 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 SSTR3P32745 418 aaPredicted RBP16.64■□□□□ 0.25
SPG7-218ENST00000568205 PRKCIP41743 596 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 CACNA2D1P54289 1103 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 RPL10AP62906 217 aaKnown RBP16.64■□□□□ 0.25
SPG7-218ENST00000568205 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 ADAM15Q13444 863 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 ARID5BQ14865 1188 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 COL19A1Q14993 1142 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 MEA1Q16626 185 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 TAF3Q5VWG9 929 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 TTC30AQ86WT1 665 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 ZNF677Q86XU0 584 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 SCN4BQ8IWT1 228 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 OR8K1Q8NGG5 319 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 SLC20A1Q8WUM9 679 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 DDX1Q92499 740 aaKnown RBP16.64■□□□□ 0.25
SPG7-218ENST00000568205 C8orf48Q96LL4 319 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 SMOQ99835 787 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 DUSP16Q9BY84 665 aa16.64■□□□□ 0.25
SPG7-218ENST00000568205 DMAP1Q9NPF5 467 aaPredicted RBP16.64■□□□□ 0.25
SPG7-218ENST00000568205 ATG2AQ2TAZ0 1938 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 F8VP50 259 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 TRIM66O15016 1216 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 CFHP08603 1231 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 SETSIPP0DME0 302 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 ATF6P18850 670 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 HNRNPH3P31942 346 aaKnown RBP16.63■□□□□ 0.25
SPG7-218ENST00000568205 GRIK1P39086 918 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 ALDH1A3P47895 512 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 GPR15P49685 360 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 BCAT1P54687 386 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 ADKP55263 362 aaKnown RBP16.63■□□□□ 0.25
SPG7-218ENST00000568205 CDR2Q01850 454 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 BST2Q10589 180 aaKnown RBP16.63■□□□□ 0.25
SPG7-218ENST00000568205 PLD1Q13393 1074 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 DDR2Q16832 855 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 CTC1Q2NKJ3 1217 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 PKDCCQ504Y2 493 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 PPM1LQ5SGD2 360 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 DENND1BQ6P3S1 775 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 SPC24Q8NBT2 197 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 UBA3Q8TBC4 463 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 CSNK1G1Q9HCP0 422 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 IMPACTQ9P2X3 320 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 PCDHGC3Q9UN70 934 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 CDH23Q9H251 3354 aa16.63■□□□□ 0.25
SPG7-218ENST00000568205 RFPL2O75678 378 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 BEST1O76090 585 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 LRG1P02750 347 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 HNRNPA1P09651 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPG7-218ENST00000568205 CHRNB2P17787 502 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 ANXA13P27216 316 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 HOXA9P31269 272 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 MAP3K7CLP57077 242 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 SLC8A3P57103 927 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 PDE4CQ08493 712 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 TWF1Q12792 350 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 CCDC85BQ15834 202 aaPredicted RBP16.62■□□□□ 0.25
SPG7-218ENST00000568205 TSR1Q2NL82 804 aaKnown RBP16.62■□□□□ 0.25
SPG7-218ENST00000568205 SDHAF4Q5VUM1 108 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 HGSNATQ68CP4 663 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 ANKRD54Q6NXT1 300 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 ZMIZ2Q8NF64 920 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
SPG7-218ENST00000568205 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
SPG7-218ENST00000568205 KCNK16Q96T55 309 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 SFXN1Q9H9B4 322 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
SPG7-218ENST00000568205 ZDHHC7Q9NXF8 308 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 CLDND1Q9NY35 253 aa16.62■□□□□ 0.25
SPG7-218ENST00000568205 GOLGA6L6A8MZA4 724 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 TBX10O75333 385 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 SERPING1P05155 500 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 MMEP08473 750 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 POU2F2P09086 479 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 SKILP12757 684 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms