RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 EZH1Q92800 747 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 BORCS6Q96GS4 357 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 SNX27Q96L92 541 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 RPS6KC1Q96S38 1066 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 RBCK1Q9BYM8 510 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 HSD3B7Q9H2F3 369 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 ELAC1Q9H777 363 aaKnown RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 MMRN2Q9H8L6 949 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 RSAD1Q9HA92 442 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 METTL14Q9HCE5 456 aaKnown RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 LRRC4CQ9HCJ2 640 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TOPORSQ9NS56 1045 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 TMEM161AQ9NX61 479 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 MIOSQ9NXC5 875 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TAB2Q9NYJ8 693 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 ARMCX3Q9UH62 379 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 GIT1Q9Y2X7 761 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 SMIM28A0A1B0GU29 152 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ARL5CA6NH57 179 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 LRRIQ3A6PVS8 624 aaPredicted RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 PES1O00541 588 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 OFD1O75665 1012 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 IL18RAPO95256 599 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 POMCP01189 267 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 FOSL1P15407 271 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ZNF18P17022 549 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 TNNI1P19237 187 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 SCNN1GP51170 649 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 TFAMQ00059 246 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 BFSP1Q12934 665 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 KRT31Q15323 416 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 SHHQ15465 462 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 SURF1Q15526 300 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 PAN2Q504Q3 1202 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 CLLU1OSQ5K130 101 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 C9orf50Q5SZB4 431 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 GLB1LQ6UWU2 654 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ALKAL1Q6UXT8 129 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 INTS8Q75QN2 995 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 TMC7Q7Z402 723 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 TRIM59Q8IWR1 403 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 CD302Q8IX05 232 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 EFCAB13Q8IY85 973 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ANKRD20A12PQ8NF67 263 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 PARD3BQ8TEW8 1205 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 HERVK_113Q902F9 699 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ZMAT2Q96NC0 199 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 CGRRF1Q99675 332 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 TUBGCP2Q9BSJ2 902 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 VPS16Q9H269 839 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 MTIF3Q9H2K0 278 aaKnown RBP8.35□□□□□ -1.07
SMG1-214ENST00000568038 SEMA6CQ9H3T2 930 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 ASB7Q9H672 318 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 PLEKHA5Q9HAU0 1116 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 UBN1Q9NPG3 1134 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG1-214ENST00000568038 SLC4A7Q9Y6M7 1214 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 MICAL3Q7RTP6 2002 aa8.35□□□□□ -1.07
SMG1-214ENST00000568038 TTC3P53804 2025 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 TBKBP1A7MCY6 615 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 PTGESO14684 152 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 SERPINC1P01008 464 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 THP07101 528 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 TPM2P07951 284 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 TMEM191BP0C7N4 346 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 EEF1GP26641 437 aaKnown RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 GCLMP48507 274 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 GUCY2FP51841 1108 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 PPP3CAQ08209 521 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 TMEM132DQ14C87 1099 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 MAN2A1Q16706 1144 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 XKR4Q5GH76 650 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 NOMO2Q5JPE7 1267 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 C1orf220Q5T0J3 134 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 USP37Q86T82 979 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 GSTCDQ8NEC7 633 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 OR5B17Q8NGF7 314 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 URGCPQ8TCY9 931 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 SLC35C1Q96A29 364 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 C18orf25Q96B23 403 aaPredicted RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 WDR89Q96FK6 387 aaPredicted RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 ANKRD36BP1Q96IX9 119 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 RNPC3Q96LT9 517 aaKnown RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 CASD1Q96PB1 797 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 CCDC86Q9H6F5 360 aaKnown RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 INTS13Q9NVM9 706 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 LIMA1Q9UHB6 759 aaKnown RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.07
SMG1-214ENST00000568038 PLAGL2Q9UPG8 496 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 CITO14578 2027 aa8.34□□□□□ -1.07
SMG1-214ENST00000568038 TRIP11Q15643 1979 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 PTPRJQ12913 1337 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 GOLGA6L3A6NEY3 463 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 STX10O60499 249 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms