RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PDCLQ13371 301 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 ORC1Q13415 861 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 CRYMQ14894 314 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 ACAP1Q15027 740 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 CCNG2Q16589 344 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 C9orf57Q5W0N0 161 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 NLRP14Q86W24 1093 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 UNC93AQ86WB7 457 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 CXCL16Q9H2A7 254 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 GRHL1Q9NZI5 618 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 TUBGCP4Q9UGJ1 667 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 SNX24Q9Y343 169 aa24.49■■□□□ 1.51
LINC00543-201ENST00000567234 F8VP50 259 aa24.48■■□□□ 1.51
LINC00543-201ENST00000567234 RFC1P35251 1148 aaPredicted RBP24.48■■□□□ 1.51
LINC00543-201ENST00000567234 NFX1Q12986 1120 aaKnown RBP24.48■■□□□ 1.51
LINC00543-201ENST00000567234 GNASQ5JWF2 1037 aa24.48■■□□□ 1.51
LINC00543-201ENST00000567234 TXLNGYQ9BZA5 131 aa24.48■■□□□ 1.51
LINC00543-201ENST00000567234 SPC25Q9HBM1 224 aa24.48■■□□□ 1.51
LINC00543-201ENST00000567234 FKTNO75072 461 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 ERBB2P04626 1255 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 RPLP2P05387 115 aaKnown RBP24.47■■□□□ 1.51
LINC00543-201ENST00000567234 CYP3A5P20815 502 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 PNPLA4P41247 253 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 RPL21P46778 160 aaKnown RBP24.47■■□□□ 1.51
LINC00543-201ENST00000567234 CACNB2Q08289 660 aaPredicted RBP24.47■■□□□ 1.51
LINC00543-201ENST00000567234 ZDHHC24Q6UX98 284 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 ATL2Q8NHH9 583 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 MYCBPAPQ8TBZ2 947 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 C1orf54Q8WWF1 131 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 CCT8L2Q96SF2 557 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 HERPUD2Q9BSE4 406 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 SAGE1Q9NXZ1 904 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 GTF2IRD1Q9UHL9 959 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 SNX9Q9Y5X1 595 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 SMIM28A0A1B0GU29 152 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 MYADML2A6NDP7 307 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 PIRO00625 290 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 FLT3P36888 993 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 CEP85LQ5SZL2 805 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 C18orf25Q96B23 403 aaPredicted RBP24.47■■□□□ 1.51
LINC00543-201ENST00000567234 SLITRK1Q96PX8 696 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 MTRF1LQ9UGC7 380 aaKnown RBP24.47■■□□□ 1.51
LINC00543-201ENST00000567234 PLAAQ9Y263 795 aa24.47■■□□□ 1.51
LINC00543-201ENST00000567234 GOLGA8SH3BPF8 625 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 M0QZ92 97 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 GAS8O95995 478 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 SETSIPP0DME0 302 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 PSMA2P25787 234 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 KCNJ1P48048 391 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 C1QTNF8P60827 252 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 MRPS6P82932 125 aaKnown RBP24.46■■□□□ 1.51
LINC00543-201ENST00000567234 DHX9Q08211 1270 aaKnown RBP24.46■■□□□ 1.51
LINC00543-201ENST00000567234 PPP1R7Q15435 360 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 UAP1Q16222 522 aaPredicted RBP24.46■■□□□ 1.51
LINC00543-201ENST00000567234 LACTB2Q53H82 288 aaPredicted RBP24.46■■□□□ 1.51
LINC00543-201ENST00000567234 ZNF560Q96MR9 790 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 CHST7Q9NS84 486 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 GDAP2Q9NXN4 497 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 TSPAN16Q9UKR8 245 aa24.46■■□□□ 1.51
LINC00543-201ENST00000567234 BRCA2P51587 3418 aa24.45■■□□□ 1.51
LINC00543-201ENST00000567234 PPEF2O14830 753 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 SEPT4O43236 478 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 AKAP5P24588 427 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 PLTPP55058 493 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 SATB1Q01826 763 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 SNCBQ16143 134 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 CCDC121Q6ZUS5 278 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 RSPH3Q86UC2 560 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 CCDC13Q8IYE1 715 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 MRPL45Q9BRJ2 306 aaKnown RBP24.45■■□□□ 1.5
LINC00543-201ENST00000567234 DNAI2Q9GZS0 605 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 WHRNQ9P202 907 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 TJP2Q9UDY2 1190 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 IPPQ9Y573 584 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 TJP3O95049 919 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 KRT1P04264 644 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 KRT7P08729 469 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 GHRP10912 638 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 CCND3P30281 292 aaPredicted RBP24.45■■□□□ 1.5
LINC00543-201ENST00000567234 PTK6Q13882 451 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 HADHQ16836 314 aaKnown RBP24.45■■□□□ 1.5
LINC00543-201ENST00000567234 GLRA4Q5JXX5 417 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 FBXO47Q5MNV8 452 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 FAM228AQ86W67 206 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 JOSD2Q8TAC2 188 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 FBXO25Q8TCJ0 367 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 ART4Q93070 314 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 APOL6Q9BWW8 343 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 HEMGNQ9BXL5 484 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 EFR3BQ9Y2G0 817 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 PTPN22Q9Y2R2 807 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 TRPV2Q9Y5S1 764 aa24.45■■□□□ 1.5
LINC00543-201ENST00000567234 C5orf60A6NFR6 353 aa24.44■■□□□ 1.5
LINC00543-201ENST00000567234 GOLGA6L10A6NI86 522 aa24.44■■□□□ 1.5
LINC00543-201ENST00000567234 H0YGN5 161 aa24.44■■□□□ 1.5
LINC00543-201ENST00000567234 EZRP15311 586 aaKnown RBP24.44■■□□□ 1.5
LINC00543-201ENST00000567234 GJC1P36383 396 aa24.44■■□□□ 1.5
LINC00543-201ENST00000567234 LMNB2Q03252 620 aa24.44■■□□□ 1.5
LINC00543-201ENST00000567234 KRT17Q04695 432 aa24.44■■□□□ 1.5
LINC00543-201ENST00000567234 PKDCCQ504Y2 493 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms