RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RUNX3Q13761 415 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 GRAMD1CQ8IYS0 662 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 STKLD1Q8NE28 680 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 MYCBPAPQ8TBZ2 947 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 PCED1BQ96HM7 432 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 XYLT2Q9H1B5 865 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 DMAC2Q9NW81 257 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 HPSEQ9Y251 543 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 FAM237AA0A1B0GTK4 181 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 EXOC3O60645 756 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 PDGFRBP09619 1106 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 AP3M2P53677 418 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 PSMC1P62191 440 aaKnown RBP15.22■□□□□ 0.03
COMMD4-216ENST00000567023 FAM160A1Q05DH4 1040 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 SCN4BQ8IWT1 228 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 FSIP1Q8NA03 581 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 KIAA0895Q8NCT3 520 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 TTC8Q8TAM2 541 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 RIN3Q8TB24 985 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 PARD3BQ8TEW8 1205 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 MYLPFQ96A32 169 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 MRPL45Q9BRJ2 306 aaKnown RBP15.22■□□□□ 0.03
COMMD4-216ENST00000567023 KCTD10Q9H3F6 313 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 HPS4Q9NQG7 708 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
COMMD4-216ENST00000567023 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 NME7Q9Y5B8 376 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 GPR179Q6PRD1 2367 aa15.22■□□□□ 0.03
COMMD4-216ENST00000567023 GREB1Q4ZG55 1949 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 A0A1B0GVL5 298 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 OTOL1A6NHN0 477 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-216ENST00000567023 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 TCF3P15923 654 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 PFKFB1P16118 471 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 PFKLP17858 780 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 BDNFP23560 247 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 HOXA6P31267 233 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 ID4P47928 161 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 TNNC1P63316 161 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
COMMD4-216ENST00000567023 FOXK2Q01167 660 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 SATB1Q01826 763 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 TRPC3Q13507 836 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 PON2Q15165 354 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 PDGFRLQ15198 375 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 KMT5BQ4FZB7 885 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 DENND5BQ6ZUT9 1274 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 SYAP1Q96A49 352 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-216ENST00000567023 CHFRQ96EP1 664 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 TTLL2Q9BWV7 592 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 EXOC1Q9NV70 894 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 GCNT4Q9P109 453 aa15.21■□□□□ 0.03
COMMD4-216ENST00000567023 ZNF638Q14966 1978 aaKnown RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 PTPRDP23468 1912 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 TRAV19A0A0A6YYK7 116 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 K7ESF4 209 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 PDXKO00764 312 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 TRDMT1O14717 391 aaKnown RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 TRIM66O15016 1216 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 C4BPAP04003 597 aaKnown RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 GRIK1P39086 918 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 PPP3CCP48454 512 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 CASP4P49662 377 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 MYL6P60660 151 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 KRT85P78386 507 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 AMPD2Q01433 879 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 ZNF77Q15935 545 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 TRIM68Q6AZZ1 485 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 CC2D1AQ6P1N0 951 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 ERMP1Q7Z2K6 904 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 KIAA2013Q8IYS2 634 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 DCLK2Q8N568 766 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 GPR161Q8N6U8 529 aaKnown RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 OR6B3Q8NGW1 331 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 CYP2S1Q96SQ9 504 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 EBF3Q9H4W6 596 aa15.2■□□□□ 0.02
COMMD4-216ENST00000567023 SMG5Q9UPR3 1016 aaKnown RBP15.2■□□□□ 0.02
COMMD4-216ENST00000567023 ANAPC1Q9H1A4 1944 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-216ENST00000567023 CKMP06732 381 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 CNR2P34972 360 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 PDE6CP51160 858 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 USP46P62068 366 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 MTF1Q14872 753 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 TDRD10Q5VZ19 366 aaKnown RBP15.19■□□□□ 0.02
COMMD4-216ENST00000567023 Q6ZS52 159 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms