RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 FAM161BQ96MY7 647 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 EPAS1Q99814 870 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 ECSITQ9BQ95 431 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 FRMD8P1Q9BZ68 369 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 KMT5AQ9NQR1 393 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 IQANK1A0A1B0GTG1 560 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 TM7SF2O76062 418 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 IFNB1P01574 187 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 C4BPAP04003 597 aaKnown RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 GNA15P30679 374 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 ACTR3P61158 418 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 DSG1Q02413 1049 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 CDK18Q07002 472 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 DMP1Q13316 513 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 CNPY1Q3B7I2 92 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 TKFCQ3LXA3 575 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 SCUBE1Q8IWY4 988 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 BSNDQ8WZ55 320 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 MMP8P22894 467 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 PSMC5P62195 406 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 CUL2Q13617 745 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 HNRNPDQ14103 355 aaKnown RBP16.41■□□□□ 0.22
COMMD4-215ENST00000566843 PSMD6Q15008 389 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 HSF5Q4G112 596 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-215ENST00000566843 TMCO4Q5TGY1 634 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 ADGRG6Q86SQ4 1221 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 LDHDQ86WU2 507 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 TREML1Q86YW5 311 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 PALM2Q8IXS6 379 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 IL31RAQ8NI17 732 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 SLC44A1Q8WWI5 657 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-215ENST00000566843 HAUS1Q96CS2 278 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 FAM111AQ96PZ2 611 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 PANX3Q96QZ0 392 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 CYTH2Q99418 400 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 SPATA16Q9BXB7 569 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 ZBTB21Q9ULJ3 1066 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 EFR3BQ9Y2G0 817 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 PPME1Q9Y570 386 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
COMMD4-215ENST00000566843 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.41■□□□□ 0.22
COMMD4-215ENST00000566843 COL2A1P02458 1487 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-215ENST00000566843 FAM237BA0A1B0GVD1 139 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 A0A1B0GVG6 124 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 PIM1P11309 404 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 AP2B1P63010 937 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 ZFYVE27Q5T4F4 411 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 TXNRD3NBQ6F5E7 133 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 IZUMO2Q6UXV1 221 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 RIPOR1Q6ZS17 1223 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 ALYREFQ86V81 257 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 RBM15BQ8NDT2 890 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 PPP2R3CQ969Q6 453 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 C7orf26Q96N11 449 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 TUBGCP5Q96RT8 1024 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 FAM213AQ9BRX8 229 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 C17orf75Q9HAS0 396 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 TBC1D22BQ9NU19 505 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 ARMCX1Q9P291 453 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 C3orf70A6NLC5 250 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 E5RJQ4 531 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 ENTPD3O75355 529 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 CIB2O75838 187 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 PIAS1O75925 651 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 VNN1O95497 513 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 RPL22P35268 128 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 CDK7P50613 346 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 PLCB3Q01970 1234 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 PTK7Q13308 1070 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 TDRD10Q5VZ19 366 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 KYAT3Q6YP21 454 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 VCX3BQ9H321 246 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 APOBEC3GQ9HC16 384 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 VCX3AQ9NNX9 186 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 COL20A1Q9P218 1284 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 TAGLN3Q9UI15 199 aa16.4■□□□□ 0.22
COMMD4-215ENST00000566843 MYH9P35579 1960 aaKnown RBP16.4■□□□□ 0.22
COMMD4-215ENST00000566843 F8VP50 259 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 BUD23O43709 281 aaKnown RBP16.39■□□□□ 0.21
COMMD4-215ENST00000566843 ATP5BP06576 529 aaKnown RBP16.39■□□□□ 0.21
COMMD4-215ENST00000566843 GDF10P55107 478 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 RTP1P59025 263 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 OGDHQ02218 1023 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 DNAL1Q4LDG9 190 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 LIN52Q52LA3 116 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 PLA2G4FQ68DD2 849 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 SPOPLQ6IQ16 392 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms