RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ARL13BQ3SXY8 428 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 KATNAL2Q8IYT4 538 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 CRYGNQ8WXF5 182 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 ART4Q93070 314 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 GMLQ99445 158 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 TSSK1BQ9BXA7 367 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 FNDC3AQ9Y2H6 1198 aaKnown RBP12.11□□□□□ -0.47
CDH1-210ENST00000566612 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
CDH1-210ENST00000566612 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 TYK2P29597 1187 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 MORF4L2Q15014 288 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 EXOC3L1Q86VI1 746 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 FAM131BQ86XD5 332 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 TNIP3Q96KP6 325 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 ST6GALNAC4Q9H4F1 302 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 SPON1Q9HCB6 807 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 SNTG2Q9NY99 539 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 PAK5Q9P286 719 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 MOCS2O96007 188 aaPredicted RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 MYCP01106 439 aaPredicted RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 AKAP5P24588 427 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 C15orf59Q2T9L4 293 aaPredicted RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 BOLA3Q53S33 107 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 ERMARDQ5T6L9 678 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 C7orf43Q8WVR3 580 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 BORCS6Q96GS4 357 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 PAFAH2Q99487 392 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 HES2Q9Y543 173 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 NFASCO94856 1347 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 AHDC1Q5TGY3 1603 aaPredicted RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 MICAL2O94851 1124 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 SLC4A1P02730 911 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 C4BPAP04003 597 aaKnown RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 SERPINB6P35237 376 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 WDR75Q8IWA0 830 aaKnown RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 FAM193BQ96PV7 902 aaPredicted RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 ACO2Q99798 780 aaKnown RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
CDH1-210ENST00000566612 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
CDH1-210ENST00000566612 MAFO75444 373 aaPredicted RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 CFHP08603 1231 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 C6orf222P0C671 652 aaPredicted RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 ADCYAP1R1P41586 468 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 DGKDQ16760 1214 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 FAM182AQ5T1J6 154 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 C9orf131Q5VYM1 1079 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 RIOX2Q8IUF8 465 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 MCUQ8NE86 351 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ZNF560Q96MR9 790 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 NCAPGQ9BPX3 1015 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 FAM167BQ9BTA0 163 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 APOBEC3GQ9HC16 384 aaKnown RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 ZFATQ9P243 1243 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 E5RJQ4 531 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ASS1P00966 412 aaKnown RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 NUDT17P0C025 328 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 KDSRQ06136 332 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 CNGA2Q16280 664 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ZC3H3Q8IXZ2 948 aaKnown RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 NDUFAF2Q8N183 169 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 C3orf20Q8ND61 904 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 SLITRK1Q96PX8 696 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 CEP41Q9BYV8 373 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 MROH8Q9H579 483 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 TELO2Q9Y4R8 837 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 O00370 1275 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 CRCPO75575 148 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 PEX19P40855 299 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ELK3P41970 407 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 RTP1P59025 263 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 SP2Q02086 613 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 KYAT1Q16773 422 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 GPC2Q8N158 579 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ARMC2Q8NEN0 867 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 CDT1Q9H211 546 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 PCDH9Q9HC56 1237 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 ABCF3Q9NUQ8 709 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 BFARQ9NZS9 450 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 HAO1Q9UJM8 370 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 CPA2P48052 419 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 COPS2P61201 443 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 ASPHQ12797 758 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 STILQ15468 1287 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms