RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 HSD3B7Q9H2F3 369 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 FAM49BQ9NUQ9 324 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 EHD2Q9NZN4 543 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 KIAA1257Q9ULG3 409 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 C5orf42Q9H799 3197 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 A0A0C4DFX4 3053 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 LRRC10BA6NIK2 292 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 C2CD4DB7Z1M9 353 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 CLDN5O00501 218 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 CCDC130P13994 396 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 SP100P23497 879 aaPredicted RBP27.74■■■□□ 2.03
NME3-209ENST00000566600 GPR15P49685 360 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 COPB1P53618 953 aaKnown RBP27.74■■■□□ 2.03
NME3-209ENST00000566600 TPM4P67936 248 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 IQCB1Q15051 598 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 PRSS36Q5K4E3 855 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 HS6ST3Q8IZP7 471 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 LRRC3Q9BY71 257 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 UXTQ9UBK9 157 aaPredicted RBP27.74■■■□□ 2.03
NME3-209ENST00000566600 PCDHB4Q9Y5E5 795 aa27.74■■■□□ 2.03
NME3-209ENST00000566600 SLC38A8A6NNN8 435 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 ACO1P21399 889 aaKnown RBP27.73■■■□□ 2.03
NME3-209ENST00000566600 TMEM270Q6UE05 265 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 PAQR9Q6ZVX9 377 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 TMC8Q8IU68 726 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 ITFG1Q8TB96 612 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 GPR152Q8TDT2 470 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 KAT5Q92993 513 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 DMAP1Q9NPF5 467 aaPredicted RBP27.73■■■□□ 2.03
NME3-209ENST00000566600 KRT82Q9NSB4 513 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 CDH7Q9ULB5 785 aa27.73■■■□□ 2.03
NME3-209ENST00000566600 DOCK6Q96HP0 2047 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 NOTCH4Q99466 2003 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 F8VP50 259 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 AP1G2O75843 785 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 NOL4O94818 638 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 PAEPP09466 180 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 SLC5A9Q2M3M2 681 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 SDHAF4Q5VUM1 108 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 FGF13Q92913 245 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 TRMT2BQ96GJ1 504 aaKnown RBP27.72■■■□□ 2.03
NME3-209ENST00000566600 KREMEN1Q96MU8 473 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 GCNAQ96QF7 691 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 MYADMQ96S97 322 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 CBX8Q9HC52 389 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 GDE1Q9NZC3 331 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 EPS15L1Q9UBC2 864 aa27.72■■■□□ 2.03
NME3-209ENST00000566600 FAM200BP0CF97 657 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 LAMP2P13473 410 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 HMGA1P17096 107 aaKnown RBP27.71■■■□□ 2.03
NME3-209ENST00000566600 ADORA2BP29275 332 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 CDC25CP30307 473 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 SGO2Q562F6 1265 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 ARHGAP17Q68EM7 881 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 DENND5BQ6ZUT9 1274 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 MYRFLQ96LU7 910 aa27.71■■■□□ 2.03
NME3-209ENST00000566600 LGALS16A8MUM7 142 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 VDRP11473 427 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 RFX1P22670 979 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 GABRR2P28476 465 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 CCR2P41597 374 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 KCNMA1Q12791 1236 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 PPP1R26Q5T8A7 1209 aaPredicted RBP27.7■■■□□ 2.02
NME3-209ENST00000566600 NPAS3Q8IXF0 933 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 TCEAL4Q96EI5 215 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 GPR88Q9GZN0 384 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 CSNK1G1Q9HCP0 422 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 ZNF334Q9HCZ1 680 aaPredicted RBP27.7■■■□□ 2.02
NME3-209ENST00000566600 MAGED2Q9UNF1 606 aaPredicted RBP27.7■■■□□ 2.02
NME3-209ENST00000566600 CNTN6Q9UQ52 1028 aa27.7■■■□□ 2.02
NME3-209ENST00000566600 NCOR1O75376 2440 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 ATP1A3P13637 1013 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 CD19P15391 556 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 CEBPBP17676 345 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 CACNA2D1P54289 1103 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 ARHGAP15Q53QZ3 475 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 RBBP8NLQ8NC74 664 aaPredicted RBP27.69■■■□□ 2.02
NME3-209ENST00000566600 ING5Q8WYH8 240 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 COL25A1Q9BXS0 654 aaPredicted RBP27.69■■■□□ 2.02
NME3-209ENST00000566600 ATXN3LQ9H3M9 355 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 SIX2Q9NPC8 291 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 ZMYM5Q9UJ78 669 aa27.69■■■□□ 2.02
NME3-209ENST00000566600 TTC28Q96AY4 2481 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 A0A1W2PRU2 124 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 GOLGA6L19H0YKK7 550 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 RTN3O95197 1032 aaPredicted RBP27.68■■■□□ 2.02
NME3-209ENST00000566600 KRT5P13647 590 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 SLC8A3P57103 927 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 MTMR3Q13615 1198 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 GJB7Q6PEY0 223 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 LRSAM1Q6UWE0 723 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 NUP93Q8N1F7 819 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 SHKBP1Q8TBC3 707 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 KCNK16Q96T55 309 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 DUSP16Q9BY84 665 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 IL21Q9HBE4 155 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 CD320Q9NPF0 282 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 PLCB1Q9NQ66 1216 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 TMEM30AQ9NV96 361 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 DNAJC12Q9UKB3 198 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms