RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 ZNF852Q6ZMS4 543 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 SCN4BQ8IWT1 228 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 SMYD4Q8IYR2 804 aaPredicted RBP13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 CELF5Q8N6W0 485 aaKnown RBP13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 MYLPFQ96A32 169 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 LRRC3BQ96PB8 259 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 FOXQ1Q9C009 403 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 LTB4R2Q9NPC1 389 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 HEBP1Q9NRV9 189 aa13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 MRPS17Q9Y2R5 130 aaKnown RBP13.48□□□□□ -0.25
LPCAT4-206ENST00000566581 COL4A3Q01955 1670 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 FRYLO94915 3013 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 SHISA7A6NL88 538 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 FAM170BA6NMN3 283 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 TRIM66O15016 1216 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 CETN3O15182 167 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 NCAM2O15394 837 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 PRAMEF12O95522 483 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 HLA-DRAP01903 254 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 DCNP07585 359 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 GRIK1P39086 918 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 MAGEA9P43362 315 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 CDH8P55286 799 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 NOP14P78316 857 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 PPP3CAQ08209 521 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 ARHGAP29Q52LW3 1261 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 MDH1BQ5I0G3 518 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 TPRG1Q6ZUI0 275 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 ZC3H3Q8IXZ2 948 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 MAB21L3Q8N8X9 362 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 B3GALNT2Q8NCR0 500 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 BPIFB1Q8TDL5 484 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 MRPS31Q92665 395 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 CLDN23Q96B33 292 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 TNIP3Q96KP6 325 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 TTLL2Q9BWV7 592 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 ELOVL4Q9GZR5 314 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 EHD2Q9NZN4 543 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 MAGED2Q9UNF1 606 aaPredicted RBP13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 CFAP54Q96N23 3096 aa13.47□□□□□ -0.25
LPCAT4-206ENST00000566581 MYO18AQ92614 2054 aaKnown RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 ZNF292O60281 2723 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 KINO60870 393 aaKnown RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 TADA3O75528 432 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 PFKLP17858 780 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 AVPR1AP37288 418 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 PPP1R2P41236 205 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 RPS9P46781 194 aaKnown RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 PPP3CCP48454 512 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 GCLMP48507 274 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 LRRC63Q05C16 580 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 UBXN2BQ14CS0 331 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 ANGPT1Q15389 498 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 UNC93AQ86WB7 457 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 ADSSL1Q8N142 457 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 CRYBG2Q8N1P7 616 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 STKLD1Q8NE28 680 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 ATOH1Q92858 354 aaPredicted RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 MSANTD3Q96H12 275 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 B3GNT5Q9BYG0 378 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 BCO2Q9BYV7 579 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 SDCBP2Q9H190 292 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 DPEP3Q9H4B8 488 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 TMEM8AQ9HCN3 771 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 TDP1Q9NUW8 608 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 THG1LQ9NWX6 298 aaKnown RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 MTF2Q9Y483 593 aaPredicted RBP13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 GVINP1Q7Z2Y8 2422 aa13.46□□□□□ -0.25
LPCAT4-206ENST00000566581 SPTBN4Q9H254 2564 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 OTOGLQ3ZCN5 2332 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 PROB1E7EW31 1015 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 F8VP50 259 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 STX10O60499 249 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 TRIM49P0CI25 452 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 TRIM49CP0CI26 452 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 CD72P21854 359 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 ANXA13P27216 316 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 ASPAP45381 313 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 FZD5Q13467 585 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 STIM1Q13586 685 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 KRT39Q6A163 491 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 TXNDC8Q6A555 127 aa13.45□□□□□ -0.26
LPCAT4-206ENST00000566581 ANKRD40Q6AI12 368 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms