RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 LPIN3Q9BQK8 851 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 MED10Q9BTT4 135 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 NUP58Q9BVL2 599 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 TTYH3Q9C0H2 523 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 CYP4F11Q9HBI6 524 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 KRT82Q9NSB4 513 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 CNTN6Q9UQ52 1028 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 PCDHB5Q9Y5E4 795 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 SZT2Q5T011 3432 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 LINC01565O15544 149 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 VNN2O95498 520 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 GLP2RO95838 553 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 C1RP00736 705 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 C8AP07357 584 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SPATA31D3P0C874 917 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 ATF2P15336 505 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 BRD2P25440 801 aaKnown RBP12.18□□□□□ -0.46
KARS-207ENST00000566560 ADORA2BP29275 332 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 GNA15P30679 374 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 ELF1P32519 619 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SOX5P35711 763 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 STAT1P42224 750 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
KARS-207ENST00000566560 TRIM14Q14142 442 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 MGAT5BQ3V5L5 792 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 CFAP221Q4G0U5 840 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 FIGNQ5HY92 759 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 LILRA6Q6PI73 481 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SPATA31D4Q6ZUB0 917 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 CCDC149Q6ZUS6 474 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 FAM71AQ8IYT1 594 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 C12orf29Q8N999 325 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SLC7A14Q8TBB6 771 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 CASP10Q92851 521 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 MRFAP1L1Q96HT8 127 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 FUBP3Q96I24 572 aaKnown RBP eCLIP12.18□□□□□ -0.46
KARS-207ENST00000566560 ZFRQ96KR1 1074 aaKnown RBP12.18□□□□□ -0.46
KARS-207ENST00000566560 RHOBTB2Q9BYZ6 727 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 ZNF518BQ9C0D4 1074 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 ABCB6Q9NP58 842 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 DZANK1Q9NVP4 752 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 MAFFQ9ULX9 164 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 YIPF1Q9Y548 306 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.461e-9■□□□□ 10.5
KARS-207ENST00000566560 INSL5Q9Y5Q6 135 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 MYO16Q9Y6X6 1858 aa12.18□□□□□ -0.46
KARS-207ENST00000566560 A0A1W2PQJ5 194 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 RNF225M0QZC1 329 aaPredicted RBP12.17□□□□□ -0.46
KARS-207ENST00000566560 FOXN3O00409 490 aaPredicted RBP12.17□□□□□ -0.46
KARS-207ENST00000566560 CLDN5O00501 218 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 CYP26A1O43174 497 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 GFPT2O94808 682 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 SEC24AO95486 1093 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 GYPCP04921 128 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 VDRP11473 427 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 PDE6CP51160 858 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 DUSP4Q13115 394 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
KARS-207ENST00000566560 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
KARS-207ENST00000566560 GOLGA7BQ2TAP0 167 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 ARHGAP17Q68EM7 881 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 TMC6Q7Z403 805 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 BAP1Q92560 729 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 B3GNT5Q9BYG0 378 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 CRISPLD1Q9H336 500 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 PLEKHA4Q9H4M7 779 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 ACP6Q9NPH0 428 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 CLDND1Q9NY35 253 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 HSFX1Q9UBD0 423 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 C2orf16Q68DN1 1984 aa12.17□□□□□ -0.46
KARS-207ENST00000566560 O00370 1275 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 THAP12O43422 761 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 NCK2O43639 380 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 TBX10O75333 385 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 AP1G2O75843 785 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 SOAT2O75908 522 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 ADCY5O95622 1261 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 CALCAP01258 141 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 LRG1P02750 347 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 TPM1P09493 284 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 HAPLN1P10915 354 aaPredicted RBP12.16□□□□□ -0.46
KARS-207ENST00000566560 BDNFP23560 247 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 CYP2F1P24903 491 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 PTK2Q05397 1052 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 PLD1Q13393 1074 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 KCNC3Q14003 757 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 PPM1LQ5SGD2 360 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 PPP1R26Q5T8A7 1209 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms