RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 BARX2Q9UMQ3 279 aaPredicted RBP19.66■□□□□ 0.74
MSLN-207ENST00000566549 RBM47A0AV96 593 aaKnown RBP19.66■□□□□ 0.74
MSLN-207ENST00000566549 E5RJQ4 531 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 VIMP08670 466 aaKnown RBP19.66■□□□□ 0.74
MSLN-207ENST00000566549 VDRP11473 427 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 PTPN7P35236 360 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 MYO1EQ12965 1108 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 ZNF268Q14587 947 aaPredicted RBP19.66■□□□□ 0.74
MSLN-207ENST00000566549 OR6B2Q6IFH4 312 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 RFX6Q8HWS3 928 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 GTF3C2Q8WUA4 911 aaPredicted RBP19.66■□□□□ 0.74
MSLN-207ENST00000566549 MRRFQ96E11 262 aaKnown RBP19.66■□□□□ 0.74
MSLN-207ENST00000566549 CYP3A43Q9HB55 503 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 CDHR5Q9HBB8 845 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 WDR35Q9P2L0 1181 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 ITGA11Q9UKX5 1188 aa19.66■□□□□ 0.74
MSLN-207ENST00000566549 C5orf60A6NFR6 353 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 GLTPD2A6NH11 291 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 NRLP54845 237 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 GAD2Q05329 585 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 C15orf59Q2T9L4 293 aaPredicted RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 PRAMEF19Q5SWL8 479 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 VSTM1Q6UX27 236 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 SRRM1Q8IYB3 904 aaKnown RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 CCHCR1Q8TD31 782 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 EIF2AQ9BY44 585 aaKnown RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 FAM49BQ9NUQ9 324 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 USP18Q9UMW8 372 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 NAALADL1Q9UQQ1 740 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 SNX9Q9Y5X1 595 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 ATP2C2O75185 946 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 ACVR2BQ13705 512 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 TMED2Q15363 201 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 DUSP28Q4G0W2 176 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 C6orf89Q6UWU4 347 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 ZBED8Q8IZ13 594 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 SLC35B2Q8TB61 432 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 FNIP1Q8TF40 1166 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 NKD2Q969F2 451 aaPredicted RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 LENG1Q96BZ8 264 aaPredicted RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 ZMAT2Q96NC0 199 aaKnown RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 APOL6Q9BWW8 343 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 VRTNQ9H8Y1 702 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 DRG1Q9Y295 367 aaKnown RBP19.65■□□□□ 0.74
MSLN-207ENST00000566549 COL1A2P08123 1366 aa19.65■□□□□ 0.74
MSLN-207ENST00000566549 STRNO43815 780 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 RNF8O76064 485 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 HMGCRP04035 888 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 ITGAVP06756 1048 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 GTF2A2P52657 109 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 TRNP1Q6NT89 227 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 FAM183BPQ6ZVS7 135 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 GDAP1Q8TB36 358 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 MCRS1Q96EZ8 462 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 PEBP4Q96S96 227 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 OSMRQ99650 979 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 ADAM33Q9BZ11 813 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 TUBGCP4Q9UGJ1 667 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 C2CD2Q9Y426 696 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 CAPN7Q9Y6W3 813 aa19.64■□□□□ 0.74
MSLN-207ENST00000566549 BRAFP15056 766 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 MMRN1Q13201 1228 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 DGKDQ16760 1214 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 GOLGA7BQ2TAP0 167 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 RNASEH2BQ5TBB1 312 aaKnown RBP19.64■□□□□ 0.73
MSLN-207ENST00000566549 CATSPER4Q7RTX7 472 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 ACOT1Q86TX2 421 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 PACS2Q86VP3 889 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 ANKMY2Q8IV38 441 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 C18orf25Q96B23 403 aaPredicted RBP19.64■□□□□ 0.73
MSLN-207ENST00000566549 LPIN3Q9BQK8 851 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 MRPL45Q9BRJ2 306 aaKnown RBP19.64■□□□□ 0.73
MSLN-207ENST00000566549 TINF2Q9BSI4 451 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 NT5C1AQ9BXI3 368 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 VPS37BQ9H9H4 285 aa19.64■□□□□ 0.73
MSLN-207ENST00000566549 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.64■□□□□ 0.73
MSLN-207ENST00000566549 EXOC1LA0A1B0GW35 172 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 DYNC1LI2O43237 492 aaPredicted RBP19.63■□□□□ 0.73
MSLN-207ENST00000566549 KCNA4P22459 653 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 ATP11AP98196 1134 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 MPP2Q14168 576 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 SPRED3Q2MJR0 410 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 PPP1R26Q5T8A7 1209 aaPredicted RBP19.63■□□□□ 0.73
MSLN-207ENST00000566549 CCDC121Q6ZUS5 278 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 RXFP2Q8WXD0 754 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 PCDH9Q9HC56 1237 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 POC1B-GALNT4F8VUJ3 575 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 HCRTO43612 131 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 TRUB2O95900 331 aaKnown RBP19.63■□□□□ 0.73
MSLN-207ENST00000566549 PDGFRAP16234 1089 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 ATP5DP30049 168 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 HOXA11P31270 313 aaPredicted RBP19.63■□□□□ 0.73
MSLN-207ENST00000566549 GABRB2P47870 512 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 CTCFP49711 727 aaPredicted RBP19.63■□□□□ 0.73
MSLN-207ENST00000566549 INCA1Q0VD86 236 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 GRB14Q14449 540 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 ANKRD22Q5VYY1 191 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 NPNTQ6UXI9 565 aa19.63■□□□□ 0.73
MSLN-207ENST00000566549 BBS12Q6ZW61 710 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms