RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CCL26Q9Y258 94 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 A0A1B0GVL5 298 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 TADA3O75528 432 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 TDGF1P13385 188 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 CXCL12P48061 93 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 AP3M2P53677 418 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 CYP27A1Q02318 531 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 STK4Q13043 487 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 WDR72Q3MJ13 1102 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 CC2D1AQ6P1N0 951 aaPredicted RBP21.55■■□□□ 1.04
CLN6-207ENST00000566347 SYNPOQ8N3V7 929 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 MYCBPAPQ8TBZ2 947 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 SYAP1Q96A49 352 aaPredicted RBP21.55■■□□□ 1.04
CLN6-207ENST00000566347 EPC1Q9H2F5 836 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 EHD2Q9NZN4 543 aa21.55■■□□□ 1.04
CLN6-207ENST00000566347 TRAV19A0A0A6YYK7 116 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 TRIM66O15016 1216 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 PHACTR2O75167 634 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 USP17L7P0C7H9 530 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 BDNFP23560 247 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 ANXA13P27216 316 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 GRIK1P39086 918 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 FAM160A1Q05DH4 1040 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 RUNX3Q13761 415 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 PON2Q15165 354 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 KMT5BQ4FZB7 885 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 SLC9A9Q8IVB4 645 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 KIAA0895Q8NCT3 520 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 OR6B3Q8NGW1 331 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 TMEM174Q8WUU8 243 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 ZNF516Q92618 1163 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 PCED1BQ96HM7 432 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 MRPL45Q9BRJ2 306 aaKnown RBP21.54■■□□□ 1.04
CLN6-207ENST00000566347 GZF1Q9H116 711 aaPredicted RBP21.54■■□□□ 1.04
CLN6-207ENST00000566347 TRPC7Q9HCX4 862 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 HPSEQ9Y251 543 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 ATP6V1DQ9Y5K8 247 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 PTPRDP23468 1912 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 GPR179Q6PRD1 2367 aa21.54■■□□□ 1.04
CLN6-207ENST00000566347 GREB1Q4ZG55 1949 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 CKMP06732 381 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 PDE6CP51160 858 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 AMPD2Q01433 879 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 GAS6Q14393 721 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 PDGFRLQ15198 375 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 MDH1BQ5I0G3 518 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 DENND5BQ6ZUT9 1274 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 SECISBP2LQ93073 1101 aaKnown RBP21.53■■□□□ 1.04
CLN6-207ENST00000566347 XYLT2Q9H1B5 865 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 HPS4Q9NQG7 708 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 RBM12Q9NTZ6 932 aaKnown RBP21.53■■□□□ 1.04
CLN6-207ENST00000566347 DMAC2Q9NW81 257 aa21.53■■□□□ 1.04
CLN6-207ENST00000566347 PDXKO00764 312 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 PAPSS2O95340 614 aaPredicted RBP21.52■■□□□ 1.04
CLN6-207ENST00000566347 MYL6P60660 151 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 CLDN10P78369 228 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 SATB1Q01826 763 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 BIRC3Q13489 604 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 CCINQ13939 588 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 PARD3BQ8TEW8 1205 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 EBF3Q9H4W6 596 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 VRTNQ9H8Y1 702 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 NCDNQ9UBB6 729 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 NXF1Q9UBU9 619 aaKnown RBP21.52■■□□□ 1.04
CLN6-207ENST00000566347 SMG5Q9UPR3 1016 aaKnown RBP21.52■■□□□ 1.04
CLN6-207ENST00000566347 ZDHHC9Q9Y397 364 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 ANAPC1Q9H1A4 1944 aa21.52■■□□□ 1.04
CLN6-207ENST00000566347 KIF20AO95235 890 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 PFKLP17858 780 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 PTPN1P18031 435 aaKnown RBP21.51■■□□□ 1.03
CLN6-207ENST00000566347 SYKP43405 635 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 ID4P47928 161 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 CASP4P49662 377 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 KCNB1Q14721 858 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 MTF1Q14872 753 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 WDR44Q5JSH3 913 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 TDRD10Q5VZ19 366 aaKnown RBP21.51■■□□□ 1.03
CLN6-207ENST00000566347 TRIM68Q6AZZ1 485 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 KIAA2013Q8IYS2 634 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 PLEKHO2Q8TD55 490 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 CCDC47Q96A33 483 aaKnown RBP21.51■■□□□ 1.03
CLN6-207ENST00000566347 EXOC4Q96A65 974 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 C8orf48Q96LL4 319 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 ELOVL4Q9GZR5 314 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 SCAND2PQ9GZW5 306 aaPredicted RBP21.51■■□□□ 1.03
CLN6-207ENST00000566347 KCTD10Q9H3F6 313 aa21.51■■□□□ 1.03
CLN6-207ENST00000566347 FAM237AA0A1B0GTK4 181 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 LRRIQ3A6PVS8 624 aaPredicted RBP21.5■■□□□ 1.03
CLN6-207ENST00000566347 A8MXQ7 604 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 NR3C1P04150 777 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 RPN1P04843 607 aaKnown RBP21.5■■□□□ 1.03
CLN6-207ENST00000566347 PPP3CCP48454 512 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 NOP14P78316 857 aaKnown RBP21.5■■□□□ 1.03
CLN6-207ENST00000566347 GRSF1Q12849 480 aaKnown RBP eCLIP21.5■■□□□ 1.03
CLN6-207ENST00000566347 NCOA4Q13772 614 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 ZNF77Q15935 545 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 ZNF699Q32M78 642 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 Q6ZS52 159 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 B3GALNT2Q8NCR0 500 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 RIN3Q8TB24 985 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms