RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CXCL12P48061 93 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 CCINQ13939 588 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 ZNF268Q14587 947 aaPredicted RBP19.59■□□□□ 0.73
USB1-213ENST00000566292 DGKKQ5KSL6 1271 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 CEP57L1Q8IYX8 460 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 PLEKHO2Q8TD55 490 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 CHFRQ96EP1 664 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 PAGE5Q96GU1 130 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 CHAMP1Q96JM3 812 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 SLC22A12Q96S37 553 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 C2orf42Q9NWW7 574 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 CGNQ9P2M7 1197 aaKnown RBP19.59■□□□□ 0.73
USB1-213ENST00000566292 SMG5Q9UPR3 1016 aaKnown RBP19.59■□□□□ 0.73
USB1-213ENST00000566292 TACC1O75410 805 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 BDNFP23560 247 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 CASP4P49662 377 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 STK4Q13043 487 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 RUNX3Q13761 415 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 PPP2R5DQ14738 602 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 KIAA0895Q8NCT3 520 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 PCED1BQ96HM7 432 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 SPATA17Q96L03 361 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 CYP2S1Q96SQ9 504 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 EBF3Q9H4W6 596 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 TRPC7Q9HCX4 862 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 ZDHHC9Q9Y397 364 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 MYO16Q9Y6X6 1858 aa19.58■□□□□ 0.72
USB1-213ENST00000566292 CACNA1AO00555 2505 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 A0A1B0GVL5 298 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 EXOC3O60645 756 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 ARSAP15289 507 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 PFKFB1P16118 471 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 GNL1P36915 607 aaPredicted RBP19.57■□□□□ 0.72
USB1-213ENST00000566292 NRLP54845 237 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 MYL6P60660 151 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 CYP27A1Q02318 531 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 DMWDQ09019 674 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 MAPRE1Q15691 268 aaKnown RBP19.57■□□□□ 0.72
USB1-213ENST00000566292 WDR72Q3MJ13 1102 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 VSTM1Q6UX27 236 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 MYCBPAPQ8TBZ2 947 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 XYLT2Q9H1B5 865 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 GCNT4Q9P109 453 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 NCDNQ9UBB6 729 aa19.57■□□□□ 0.72
USB1-213ENST00000566292 KIAA1549LQ6ZVL6 1849 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 DNAH14Q0VDD8 3507 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 C2orf78A6NCI8 922 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 K7ESF4 209 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 PAPSS2O95340 614 aaPredicted RBP19.56■□□□□ 0.72
USB1-213ENST00000566292 STAU1O95793 577 aaKnown RBP19.56■□□□□ 0.72
USB1-213ENST00000566292 HOXC13P31276 330 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 GRIK1P39086 918 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 USP46P62068 366 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 FAM160A1Q05DH4 1040 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 USP4Q13107 963 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 ZNF77Q15935 545 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 KMT5BQ4FZB7 885 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 MDH1BQ5I0G3 518 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 ARL14EPQ8N8R7 260 aaPredicted RBP19.56■□□□□ 0.72
USB1-213ENST00000566292 OR6B3Q8NGW1 331 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 RMDN1Q96DB5 314 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 SNX25Q9H3E2 840 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 DPEP3Q9H4B8 488 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 EXOC1Q9NV70 894 aa19.56■□□□□ 0.72
USB1-213ENST00000566292 TRAV19A0A0A6YYK7 116 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 LRRIQ3A6PVS8 624 aaPredicted RBP19.55■□□□□ 0.72
USB1-213ENST00000566292 FAM163BP0C2L3 166 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 USP17L7P0C7H9 530 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 CMA1P23946 247 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 ATICP31939 592 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 TNNC1P63316 161 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 TRPC3Q13507 836 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 MTF1Q14872 753 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 TMEM196Q5HYL7 178 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 TDRD10Q5VZ19 366 aaKnown RBP19.55■□□□□ 0.72
USB1-213ENST00000566292 FSTL4Q6MZW2 842 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 CC2D1AQ6P1N0 951 aaPredicted RBP19.55■□□□□ 0.72
USB1-213ENST00000566292 PKN3Q6P5Z2 889 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 SYNPOQ8N3V7 929 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 GOLGA5Q8TBA6 731 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 PARD3BQ8TEW8 1205 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 KCTD10Q9H3F6 313 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 TMEM30AQ9NV96 361 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 DMAC2Q9NW81 257 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 NXF1Q9UBU9 619 aaKnown RBP19.55■□□□□ 0.72
USB1-213ENST00000566292 HPSEQ9Y251 543 aa19.55■□□□□ 0.72
USB1-213ENST00000566292 EML5Q05BV3 1969 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 CHURC1-FNTBB4DL54 471 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 F8VP50 259 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 TRDMT1O14717 391 aaKnown RBP19.54■□□□□ 0.72
USB1-213ENST00000566292 CKMP06732 381 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 PTPN1P18031 435 aaKnown RBP19.54■□□□□ 0.72
USB1-213ENST00000566292 FNTBP49356 437 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 CACNA2D1P54289 1103 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 CLDN10P78369 228 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 PSMD2Q13200 908 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 PDGFRLQ15198 375 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 DENND5BQ6ZUT9 1274 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 FSIP1Q8NA03 581 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 SYAP1Q96A49 352 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms