RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CCDC94Q9BW85 323 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 MYH13Q9UKX3 1938 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 PRAMEF27A3QJZ7 478 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 H0YAE9 185 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 NMT2O60551 498 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SIN3BO75182 1162 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 DEXIO95424 95 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SNRNP70P08621 437 aaKnown RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 CYP2D6P10635 497 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 HIBADHP31937 336 aaKnown RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 MLH1P40692 756 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 MC1RQ01726 317 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 ACTN3Q08043 901 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 GRAPQ13588 217 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 POLD3Q15054 466 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 MUM1Q2TAK8 710 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 RESP18Q5W5W9 173 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SZRD1Q7Z422 152 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SP8Q8IXZ3 490 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 PRR18Q8N4B5 295 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 GRAPLQ8TC17 118 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 USP6NLQ92738 828 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 LRCH3Q96II8 777 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 COG8Q96MW5 612 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 PCDHA4Q9UN74 947 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 BAZ2BQ9UIF8 2168 aaKnown RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 MYH6P13533 1939 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 NT5C1B-RDH14C9J2C7 533 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 SHOXO15266 292 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 FOXN1O15353 648 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 PLA2G6O60733 806 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 PLEKHA8P1O95397 391 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 ALDH1A1P00352 501 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 ALOX15P16050 662 aaPredicted RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 VCAM1P19320 739 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 ADAM9Q13443 819 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 PLS1Q14651 629 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 TAF2Q6P1X5 1199 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 DPP8Q6V1X1 898 aaPredicted RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 MARK2Q7KZI7 788 aaKnown RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 ZNF566Q969W8 418 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 C16orf45Q96MC5 204 aaPredicted RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 CABP5Q9NP86 173 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 VPS54Q9P1Q0 977 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 B4GALT6Q9UBX8 382 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 DUSP12Q9UNI6 340 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 GPR55Q9Y2T6 319 aaPredicted RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 PCDHB6Q9Y5E3 794 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 LRRC72A6NJI9 287 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 CUTAO60888 179 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 SMC2O95347 1197 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 PDHA1P08559 390 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 CLNS1AP54105 237 aaKnown RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 RNASE9P60153 205 aaKnown RBP11.34□□□□□ -0.59
UBFD1-205ENST00000566136 CT83Q5H943 113 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 FAM47AQ5JRC9 791 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 OLFML2BQ68BL8 750 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 KLHDC10Q6PID8 442 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 PRDM12Q9H4Q4 367 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
UBFD1-205ENST00000566136 EPS15P42566 896 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 TKTL1P51854 596 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 ATP11AP98196 1134 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 CDCP2Q5VXM1 449 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 LRRC8AQ8IWT6 810 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 OXR1Q8N573 874 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 EXOC4Q96A65 974 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 APIPQ96GX9 242 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 IFNKQ9P0W0 207 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 CYP8B1Q9UNU6 501 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 MYPNQ86TC9 1320 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 A0A1W2PPC4 97 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 SLC12A8A0AV02 714 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 CACNB4O00305 520 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-205ENST00000566136 TXNL1O43396 289 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 ITGBL1O95965 494 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-205ENST00000566136 PAHP00439 452 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 SKIV2L2P42285 1042 aaKnown RBP11.33□□□□□ -0.6
UBFD1-205ENST00000566136 RABIFP47224 123 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 SLC12A3P55017 1021 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 ADKP55263 362 aaKnown RBP11.33□□□□□ -0.6
UBFD1-205ENST00000566136 SLC12A1Q13621 1099 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBFD1-205ENST00000566136 CCDC116Q8IYX3 515 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-205ENST00000566136 FETUBQ9UGM5 382 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 AKT3Q9Y243 479 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 LTBP1Q14766 1721 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 PASKQ96RG2 1323 aa11.33□□□□□ -0.6
UBFD1-205ENST00000566136 A8MV72 311 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms