RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ANAPC1Q9H1A4 1944 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 NUP210Q8TEM1 1887 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 NOL4O94818 638 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 TPM2P07951 284 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 ACO1P21399 889 aaKnown RBP22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 PON1P27169 355 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 SSTR3P32745 418 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 ORC1Q13415 861 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 DDR2Q16832 855 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 ARHGEF19Q8IW93 802 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 DHX40Q8IX18 779 aaKnown RBP22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 NPAS3Q8IXF0 933 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 C12orf29Q8N999 325 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 SLC4A11Q8NBS3 891 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 ITFG1Q8TB96 612 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 FGF13Q92913 245 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 MYADMQ96S97 322 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 GDE1Q9NZC3 331 aa22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 LIMA1Q9UHB6 759 aaKnown RBP22.37■■□□□ 1.17
SHCBP1-205ENST00000566016 LRRC10BA6NIK2 292 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 CLDN5O00501 218 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 LAMP2P13473 410 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 HMGA1P17096 107 aaKnown RBP22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 SP100P23497 879 aaPredicted RBP22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 ANXA13P27216 316 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 GBP2P32456 591 aaPredicted RBP22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 GRIK1P39086 918 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 CCR2P41597 374 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 GPR15P49685 360 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 SCN4BQ8IWT1 228 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 HS6ST3Q8IZP7 471 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 SLC2A14Q8TDB8 520 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 CSNK1G1Q9HCP0 422 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 DMAP1Q9NPF5 467 aaPredicted RBP22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 FAM49BQ9NUQ9 324 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 TMEM30AQ9NV96 361 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 TAB2Q9NYJ8 693 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 EHD2Q9NZN4 543 aa22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 UXTQ9UBK9 157 aaPredicted RBP22.36■■□□□ 1.17
SHCBP1-205ENST00000566016 F8VP50 259 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 CCDC130P13994 396 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 SLC9A1P19634 815 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 CDC25CP30307 473 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 TAF12Q16514 161 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 ZNF394Q53GI3 561 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 GIPC2Q8TF65 315 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 KAT5Q92993 513 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 CYFIP2Q96F07 1278 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 KREMEN1Q96MU8 473 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 MED10Q9BTT4 135 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 ZNF334Q9HCZ1 680 aaPredicted RBP22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 KRT82Q9NSB4 513 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 CNTN6Q9UQ52 1028 aa22.35■■□□□ 1.17
SHCBP1-205ENST00000566016 MOSPD3O75425 235 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 PAEPP09466 180 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 MYL4P12829 197 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 CACNA2D1P54289 1103 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 IQCB1Q15051 598 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 ARHGAP17Q68EM7 881 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 GAREM2Q75VX8 874 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 RRAGAQ7L523 313 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 SHKBP1Q8TBC3 707 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 GPR152Q8TDT2 470 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 TCEAL4Q96EI5 215 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 IL21Q9HBE4 155 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 PNPLA8Q9NP80 782 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 KIAA1257Q9ULG3 409 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 SLC38A8A6NNN8 435 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 PES1O00541 588 aaKnown RBP22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 AP1G2O75843 785 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 FAM200BP0CF97 657 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 CEBPBP17676 345 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 RFX1P22670 979 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 ZNF132P52740 706 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 MFAP3P55082 362 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 SDHAF4Q5VUM1 108 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 TMEM270Q6UE05 265 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 DENND5BQ6ZUT9 1274 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 RNF135Q8IUD6 432 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 NXPE3Q969Y0 559 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 HEXIM2Q96MH2 286 aaKnown RBP22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 TTLL2Q9BWV7 592 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 GPR88Q9GZN0 384 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 SIX2Q9NPC8 291 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 UBE2TQ9NPD8 197 aaPredicted RBP22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 ZMYM5Q9UJ78 669 aa22.34■■□□□ 1.17
SHCBP1-205ENST00000566016 LGALS16A8MUM7 142 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 BECN2A8MW95 431 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 CDK11BP21127 795 aaKnown RBP22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 GABRR2P28476 465 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 COPB1P53618 953 aaKnown RBP22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 FKBP15Q5T1M5 1219 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 APTXQ7Z2E3 356 aaKnown RBP22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 ING5Q8WYH8 240 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 GCNAQ96QF7 691 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 VPS16Q9H269 839 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 IGSF9Q9P2J2 1179 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 PCDHB4Q9Y5E5 795 aa22.33■■□□□ 1.16
SHCBP1-205ENST00000566016 MYO16Q9Y6X6 1858 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 A0A1W2PRU2 124 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms