RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CYP2F1P24903 491 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 CA8P35219 290 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 TUFMP49411 452 aaKnown RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 PTK2Q05397 1052 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 GABPB1Q06547 395 aaPredicted RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 DUSP4Q13115 394 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 TRIM14Q14142 442 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 STILQ15468 1287 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 MEA1Q16626 185 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 CCDC142Q17RM4 750 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 PKDCCQ504Y2 493 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 PPP1R26Q5T8A7 1209 aaPredicted RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 VSTM1Q6UX27 236 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 SPATA31D4Q6ZUB0 917 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 SLC47A2Q86VL8 602 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 ANKRD52Q8NB46 1076 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 KREMEN2Q8NCW0 462 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 MYLPFQ96A32 169 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 PGLYRP2Q96PD5 576 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 SPAG5Q96R06 1193 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 ACP6Q9NPH0 428 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 SLC27A5Q9Y2P5 690 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 O00370 1275 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 ATP8B1O43520 1251 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CSPG5O95196 566 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
SF3B3-206ENST00000565990 KRT5P13647 590 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CYP11B1P15538 503 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 HOXA9P31269 272 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CASP14P31944 242 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 ELF1P32519 619 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 LTBRP36941 435 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 USP8P40818 1118 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CYP27A1Q02318 531 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CCDC149Q6ZUS6 474 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 SPATA2LQ8IUW3 424 aaPredicted RBP13.37□□□□□ -0.27
SF3B3-206ENST00000565990 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 SLC2A14Q8TDB8 520 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CASP10Q92851 521 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 C8orf48Q96LL4 319 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 RHOBTB2Q9BYZ6 727 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 IGFLR1Q9H665 355 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CYP4F11Q9HBI6 524 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
SF3B3-206ENST00000565990 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
SF3B3-206ENST00000565990 LUC7L2Q9Y383 392 aaKnown RBP13.37□□□□□ -0.27
SF3B3-206ENST00000565990 ZNF638Q14966 1978 aaKnown RBP13.37□□□□□ -0.27
SF3B3-206ENST00000565990 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 NOTCH4Q99466 2003 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 LRRC53A6NM62 1247 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 CLDN5O00501 218 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 MED7O43513 233 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 ZMYND10O75800 440 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 BEST1O76090 585 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 GFPT2O94808 682 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 CALCAP01258 141 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 POU2F2P09086 479 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 CCDC172P0C7W6 258 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 FOSL2P15408 326 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 FERP16591 822 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 BDNFP23560 247 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 GNA15P30679 374 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 PRKCIP41743 596 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
SF3B3-206ENST00000565990 ZMIZ2Q8NF64 920 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 CMASQ8NFW8 434 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-206ENST00000565990 OR8K1Q8NGG5 319 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
SF3B3-206ENST00000565990 SPATA17Q96L03 361 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 KCNK16Q96T55 309 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 DNAJC7Q99615 494 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 DUSP16Q9BY84 665 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 ZNF518BQ9C0D4 1074 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 LHX5Q9H2C1 402 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 TMEM30AQ9NV96 361 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 ZDHHC7Q9NXF8 308 aa13.36□□□□□ -0.27
SF3B3-206ENST00000565990 ABI2Q9NYB9 513 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-206ENST00000565990 NOCTQ9UK39 431 aaKnown RBP13.36□□□□□ -0.27
SF3B3-206ENST00000565990 PATJQ8NI35 1801 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 TNFRSF10BO14763 440 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 LINC01565O15544 149 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 HNRNPA1P09651 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
SF3B3-206ENST00000565990 CCDC130P13994 396 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 CD19P15391 556 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 HOXB8P17481 243 aaPredicted RBP13.35□□□□□ -0.27
SF3B3-206ENST00000565990 CHRNB2P17787 502 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 FECHP22830 423 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 KRT9P35527 623 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 GPD2P43304 727 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms