RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 NPAS4Q8IUM7 802 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM199Q8N511 208 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 OLIG1Q8TAK6 271 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 ZNF606Q8WXB4 792 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 CYFIP2Q96F07 1278 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 NT5C1AQ9BXI3 368 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 PACSIN1Q9BY11 444 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 SNX25Q9H3E2 840 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 SLITRK6Q9H5Y7 841 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 PACSIN2Q9UNF0 486 aaPredicted RBP9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 MICAL3Q7RTP6 2002 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 A0A0A6YYK5 440 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 ABHD14A-ACY1A0A1B0GW23 586 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 ANKRD62A6NC57 917 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 MYO1FO00160 1098 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CEP104O60308 925 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 EFCAB14O75071 495 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 LSM8O95777 96 aaKnown RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 PFKMP08237 780 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 VDRP11473 427 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 HPDP32754 393 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CTNNA1P35221 906 aaKnown RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CLCNKBP51801 687 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CDR1P51861 262 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 NDST1P52848 882 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 RNASELQ05823 741 aaKnown RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 STILQ15468 1287 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CLEC16AQ2KHT3 1053 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 SOWAHAQ2M3V2 549 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 ZNF394Q53GI3 561 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CLLU1OSQ5K130 101 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 ACAD10Q6JQN1 1059 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 MFSD5Q6N075 450 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 DCLRE1AQ6PJP8 1040 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 UBE2Q1Q7Z7E8 422 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 SYCE1Q8N0S2 351 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 LRRC57Q8N9N7 239 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 SLC4A11Q8NBS3 891 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 SPATA18Q8TC71 538 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CTNNBL1Q8WYA6 563 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 P3H4Q92791 437 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 TRIM11Q96F44 468 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 FAM193BQ96PV7 902 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 ZNF518BQ9C0D4 1074 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 ACP6Q9NPH0 428 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 PRDM5Q9NQX1 630 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 PCDHGC3Q9UN70 934 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 CEP83Q9Y592 693 aa9.94□□□□□ -0.82
CNEP1R1-206ENST00000565556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TRIM43BA6NCK2 446 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 GMNCA6NCL1 334 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CASTOR2A6NHX0 329 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 H0YGN5 161 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CYB561D2O14569 222 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 SPTLC1O15269 473 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 FTLP02792 175 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM253P0C7T8 217 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 FGFR1P11362 822 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CD19P15391 556 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 EN2P19622 333 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 ECHS1P30084 290 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 GNL1P36915 607 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 SEC24CP53992 1094 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 GALCP54803 685 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 GSCP56915 257 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 DSC1Q08554 894 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 ZNF844Q08AG5 666 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 SGO2Q562F6 1265 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 SPDYCQ5MJ68 293 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 C6orf89Q6UWU4 347 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 DSTYKQ6XUX3 929 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CCDC13Q8IYE1 715 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM86AQ8N2M4 240 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 OR6B3Q8NGW1 331 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CCDC26Q8TAB7 109 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TRIM43Q96BQ3 446 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 SENP8Q96LD8 212 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 HEXIM2Q96MH2 286 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 PCDHB18PQ96TA0 734 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 MRPL45Q9BRJ2 306 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 MRPL9Q9BYD2 267 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 ELOVL4Q9GZR5 314 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 LHX5Q9H2C1 402 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CENPHQ9H3R5 247 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 SLC12A6Q9UHW9 1150 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 NFS1Q9Y697 457 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMCO5BA8MYB1 307 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CHUKO15111 745 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TRAPPC3O43617 180 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 B3GAT3O94766 335 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CYP1A1P04798 512 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 MYBL1P10243 752 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 UNGP13051 313 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 BRD2P25440 801 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 RDXP35241 583 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 NSFP46459 744 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms