RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 TANGO2Q6ICL3 276 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 TRIM59Q8IWR1 403 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-212ENST00000565517 KXD1Q9BQD3 176 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 DNAI2Q9GZS0 605 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 SLITRK6Q9H5Y7 841 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 TASP1Q9H6P5 420 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 ATP8B3O60423 1300 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 P4HA2O15460 535 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 CCDC192P0DO97 292 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 DDX6P26196 483 aaKnown RBP eCLIP16.41■□□□□ 0.22
COMMD4-212ENST00000565517 ANXA13P27216 316 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-212ENST00000565517 GPR158Q5T848 1215 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 TMEM150AQ86TG1 271 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 ACOT1Q86TX2 421 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 FBXL6Q8N531 539 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 GPT2Q8TD30 523 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 NT5C1AQ9BXI3 368 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.41■□□□□ 0.22
COMMD4-212ENST00000565517 FBXL21Q9UKT6 434 aa16.41■□□□□ 0.22
COMMD4-212ENST00000565517 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-212ENST00000565517 CILPO75339 1184 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 GPC5P78333 572 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 PFKPQ01813 784 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 CETN1Q12798 172 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 DENND5BQ6ZUT9 1274 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 PAQR9Q6ZVX9 377 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 ARID3BQ8IVW6 561 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-212ENST00000565517 ST13P5Q8NFI4 369 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-212ENST00000565517 DEPDC1BQ8WUY9 529 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 MED15Q96RN5 788 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 OBP2AQ9NY56 170 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 DACH1Q9UI36 760 aa16.4■□□□□ 0.22
COMMD4-212ENST00000565517 F8VP50 259 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 CLDN5O00501 218 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 CFHP08603 1231 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 PSMC3P17980 439 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 ERCC5P28715 1186 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-212ENST00000565517 PPP3CCP48454 512 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 CYP4F8P98187 520 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 KCNH2Q12809 1159 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 STXBP5Q5T5C0 1151 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 VITQ6UXI7 678 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 RBM43Q6ZSC3 357 aaKnown RBP16.39■□□□□ 0.21
COMMD4-212ENST00000565517 FAM35AQ86V20 835 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 MFSD6LQ8IWD5 586 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 SUGP1Q8IWZ8 645 aaKnown RBP16.39■□□□□ 0.21
COMMD4-212ENST00000565517 FUKQ8N0W3 1084 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 WHAMMQ8TF30 809 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
COMMD4-212ENST00000565517 TATDN2Q93075 761 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 SMARCD1Q96GM5 515 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 SLC46A2Q9BY10 475 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 TMEM30AQ9NV96 361 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 HMGXB4Q9UGU5 601 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.39■□□□□ 0.21
COMMD4-212ENST00000565517 ZNF318Q5VUA4 2279 aa16.39■□□□□ 0.21
COMMD4-212ENST00000565517 KMT2EQ8IZD2 1858 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 HEPACAM2A8MVW5 462 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 MBD3O95983 291 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 CD58P19256 250 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-212ENST00000565517 VIPR2P41587 438 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 CACNA2D1P54289 1103 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 MON1AQ86VX9 555 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 CMTM8Q8IZV2 173 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 SIX5Q8N196 739 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 NUP93Q8N1F7 819 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 C12orf29Q8N999 325 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 STKLD1Q8NE28 680 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 TWNKQ96RR1 684 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 HNRNPABQ99729 332 aaKnown RBP16.38■□□□□ 0.21
COMMD4-212ENST00000565517 TRMT61BQ9BVS5 477 aaKnown RBP16.38■□□□□ 0.21
COMMD4-212ENST00000565517 CSNK1G1Q9HCP0 422 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-212ENST00000565517 TRPV5Q9NQA5 729 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 CISHQ9NSE2 258 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 COMMD8Q9NX08 183 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 PATJQ8NI35 1801 aa16.38■□□□□ 0.21
COMMD4-212ENST00000565517 KRBA1A5PL33 1030 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 TADA3O75528 432 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 RTN3O95197 1032 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-212ENST00000565517 AFPP02771 609 aaKnown RBP16.37■□□□□ 0.21
COMMD4-212ENST00000565517 PFKLP17858 780 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 COL9A1P20849 921 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 CLCN5P51795 746 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 YWHAEP62258 255 aaKnown RBP16.37■□□□□ 0.21
COMMD4-212ENST00000565517 CUL2Q13617 745 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 MAB21L3Q8N8X9 362 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 LMO3Q8TAP4 145 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 SLC2A14Q8TDB8 520 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 DNASE1L2Q92874 299 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 IRF7Q92985 503 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms