RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CDH9Q9ULB4 789 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 KIAA1549LQ6ZVL6 1849 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 C2orf78A6NCI8 922 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 CHURC1-FNTBB4DL54 471 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 BDNFP23560 247 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 MAGEA11P43364 429 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 FNTBP49356 437 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 CACNA2D1P54289 1103 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 FSTL4Q6MZW2 842 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 KIAA0895Q8NCT3 520 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 FAM126AQ9BYI3 521 aaPredicted RBP25.4■■□□□ 1.66
RAB40C-209ENST00000565511 DPEP3Q9H4B8 488 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 FAM13BQ9NYF5 915 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 GCNT4Q9P109 453 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 NCDNQ9UBB6 729 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 RCOR1Q9UKL0 485 aa25.4■■□□□ 1.66
RAB40C-209ENST00000565511 HSP90AA1P07900 732 aaKnown RBP25.39■■□□□ 1.66
RAB40C-209ENST00000565511 TNNI1P19237 187 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 TGM1P22735 817 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 USP4Q13107 963 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 RUNX3Q13761 415 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 ZNF268Q14587 947 aaPredicted RBP25.39■■□□□ 1.66
RAB40C-209ENST00000565511 ZNF77Q15935 545 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 MDH1BQ5I0G3 518 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 C1orf228Q6PIY5 440 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 C12orf56Q8IXR9 622 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 PCED1BQ96HM7 432 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 MMS19Q96T76 1030 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 XYLT2Q9H1B5 865 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 FBRSL1Q9HCM7 1045 aaKnown RBP25.39■■□□□ 1.66
RAB40C-209ENST00000565511 PARD6AQ9NPB6 346 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 POLR3BQ9NW08 1133 aaPredicted RBP25.39■■□□□ 1.66
RAB40C-209ENST00000565511 THG1LQ9NWX6 298 aaKnown RBP25.39■■□□□ 1.66
RAB40C-209ENST00000565511 ZMYM5Q9UJ78 669 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 ZDHHC9Q9Y397 364 aa25.39■■□□□ 1.66
RAB40C-209ENST00000565511 PVALEFA0A1B0GWK0 134 aa25.38■■□□□ 1.65
RAB40C-209ENST00000565511 MYL6P60660 151 aa25.38■■□□□ 1.65
RAB40C-209ENST00000565511 STK4Q13043 487 aa25.38■■□□□ 1.65
RAB40C-209ENST00000565511 DGKKQ5KSL6 1271 aa25.38■■□□□ 1.65
RAB40C-209ENST00000565511 KIF9Q9HAQ2 790 aa25.38■■□□□ 1.65
RAB40C-209ENST00000565511 MAGEC2Q9UBF1 373 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-209ENST00000565511 UXTQ9UBK9 157 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-209ENST00000565511 EML5Q05BV3 1969 aa25.38■■□□□ 1.65
RAB40C-209ENST00000565511 HRO43593 1189 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 PAPSS2O95340 614 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-209ENST00000565511 CYP27A1Q02318 531 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 MTF1Q14872 753 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 KNOP1Q1ED39 458 aaKnown RBP25.37■■□□□ 1.65
RAB40C-209ENST00000565511 HEATR6Q6AI08 1181 aaKnown RBP25.37■■□□□ 1.65
RAB40C-209ENST00000565511 C4orf50Q6ZRC1 276 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 HS2ST1Q7LGA3 356 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 ARL14EPQ8N8R7 260 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-209ENST00000565511 PAGE5Q96GU1 130 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 FNBP1Q96RU3 617 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 R3HCC1Q9Y3T6 440 aaKnown RBP25.37■■□□□ 1.65
RAB40C-209ENST00000565511 WNT6Q9Y6F9 365 aa25.37■■□□□ 1.65
RAB40C-209ENST00000565511 TACC1O75410 805 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 SLFN14P0C7P3 912 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 PFKFB1P16118 471 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 SNRPFP62306 86 aaKnown RBP25.36■■□□□ 1.65
RAB40C-209ENST00000565511 ZXDBP98169 803 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 TMEM196Q5HYL7 178 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 ATL3Q6DD88 541 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 TTC16Q8NEE8 873 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 MYCBPAPQ8TBZ2 947 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 SPATA17Q96L03 361 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 SMYD3Q9H7B4 428 aa25.36■■□□□ 1.65
RAB40C-209ENST00000565511 SDK1Q7Z5N4 2213 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 TRAV19A0A0A6YYK7 116 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 A0A1B0GVL5 298 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 LRRIQ3A6PVS8 624 aaPredicted RBP25.35■■□□□ 1.65
RAB40C-209ENST00000565511 SOBPA7XYQ1 873 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 CLDN5O00501 218 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 EGFP01133 1207 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 GNL1P36915 607 aaPredicted RBP25.35■■□□□ 1.65
RAB40C-209ENST00000565511 FAM160A1Q05DH4 1040 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 WDR72Q3MJ13 1102 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 KMT5BQ4FZB7 885 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 TDRD10Q5VZ19 366 aaKnown RBP25.35■■□□□ 1.65
RAB40C-209ENST00000565511 VSTM1Q6UX27 236 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 OR6B3Q8NGW1 331 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 EZH1Q92800 747 aaPredicted RBP25.35■■□□□ 1.65
RAB40C-209ENST00000565511 ZNF518BQ9C0D4 1074 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 DMAC2Q9NW81 257 aa25.35■■□□□ 1.65
RAB40C-209ENST00000565511 SPTBN2O15020 2390 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 NCOR2Q9Y618 2525 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 F8VP50 259 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 EXOC3O60645 756 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 CKMP06732 381 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 GRIK1P39086 918 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 RAP1GAPP47736 663 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 NRLP54845 237 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 CEP57L1Q8IYX8 460 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 SH3RF2Q8TEC5 729 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 SDCBP2Q9H190 292 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 SNX25Q9H3E2 840 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 KCTD10Q9H3F6 313 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 NXF1Q9UBU9 619 aaKnown RBP25.34■■□□□ 1.65
RAB40C-209ENST00000565511 CFAP45Q9UL16 551 aa25.34■■□□□ 1.65
RAB40C-209ENST00000565511 TRDMT1O14717 391 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms