RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 SLC9A9Q8IVB4 645 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 SCN4BQ8IWT1 228 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 TRMT2BQ96GJ1 504 aaKnown RBP15.73■□□□□ 0.11
USB1-210ENST00000565151 FUBP3Q96I24 572 aaKnown RBP eCLIP15.73■□□□□ 0.11
USB1-210ENST00000565151 FNBP1Q96RU3 617 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 MMS19Q96T76 1030 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 SMYD3Q9H7B4 428 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 GKN1Q9NS71 199 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 FBXO4Q9UKT5 387 aa15.73■□□□□ 0.11
USB1-210ENST00000565151 C2orf78A6NCI8 922 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 CLDN5O00501 218 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 LAMTOR5O43504 91 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 TACC1O75410 805 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 NR3C1P04150 777 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 CSH1P0DML2 217 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 CSH2P0DML3 217 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 ARSAP15289 507 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 SYKP43405 635 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 RAP1GAPP47736 663 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 RPL10AP62906 217 aaKnown RBP15.72■□□□□ 0.11
USB1-210ENST00000565151 DMWDQ09019 674 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 PSMD2Q13200 908 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 WDR72Q3MJ13 1102 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 ARHGAP29Q52LW3 1261 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 MDH1BQ5I0G3 518 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 PAQR9Q6ZVX9 377 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 YAF2Q8IY57 180 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 MYCBPAPQ8TBZ2 947 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 B3GNT5Q9BYG0 378 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 FBRSL1Q9HCM7 1045 aaKnown RBP15.72■□□□□ 0.11
USB1-210ENST00000565151 TDP1Q9NUW8 608 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 EXOC1Q9NV70 894 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 CGNQ9P2M7 1197 aaKnown RBP15.72■□□□□ 0.11
USB1-210ENST00000565151 NXF1Q9UBU9 619 aaKnown RBP15.72■□□□□ 0.11
USB1-210ENST00000565151 USP25Q9UHP3 1055 aa15.72■□□□□ 0.11
USB1-210ENST00000565151 SPAG17Q6Q759 2223 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 LILRB5O75023 590 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 RHOBTB3O94955 611 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 PTPN1P18031 435 aaKnown RBP15.71■□□□□ 0.11
USB1-210ENST00000565151 GNL1P36915 607 aaPredicted RBP15.71■□□□□ 0.11
USB1-210ENST00000565151 MAGEA9P43362 315 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 KPNA1P52294 538 aaPredicted RBP15.71■□□□□ 0.11
USB1-210ENST00000565151 SATB1Q01826 763 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 CYP27A1Q02318 531 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 PON2Q15165 354 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 TAF12Q16514 161 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 PKN3Q6P5Z2 889 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 DCLK2Q8N568 766 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 CELF5Q8N6W0 485 aaKnown RBP15.71■□□□□ 0.11
USB1-210ENST00000565151 FSIP1Q8NA03 581 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 CSGALNACT1Q8TDX6 532 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 ZNF518BQ9C0D4 1074 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 EBF3Q9H4W6 596 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 VRTNQ9H8Y1 702 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 MAGEC2Q9UBF1 373 aaPredicted RBP15.71■□□□□ 0.11
USB1-210ENST00000565151 MAPK8IP1Q9UQF2 711 aa15.71■□□□□ 0.11
USB1-210ENST00000565151 MRPS17Q9Y2R5 130 aaKnown RBP15.71■□□□□ 0.11
USB1-210ENST00000565151 MYO18AQ92614 2054 aaKnown RBP15.71■□□□□ 0.1
USB1-210ENST00000565151 A0A1W2PQ27 194 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 A0A1W2PQ64 194 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 A0A1W2PQD8 194 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 F8VP50 259 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 PDXKO00764 312 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 DPYSL4O14531 572 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 LMNAP02545 664 aaKnown RBP15.7■□□□□ 0.1
USB1-210ENST00000565151 CCINQ13939 588 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 ZNF77Q15935 545 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 SPOPLQ6IQ16 392 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 MAMSTRQ6ZN01 415 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 KRBA2Q6ZNG9 492 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 RALGPS2Q86X27 583 aaPredicted RBP15.7■□□□□ 0.1
USB1-210ENST00000565151 ARL14EPQ8N8R7 260 aaPredicted RBP15.7■□□□□ 0.1
USB1-210ENST00000565151 OR6B3Q8NGW1 331 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 SPATA17Q96L03 361 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 GCNAQ96QF7 691 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 HMGXB4Q9UGU5 601 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 TRAF3IP3Q9Y228 551 aa15.7■□□□□ 0.1
USB1-210ENST00000565151 ANTXRLA6NF34 631 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 NCAM2O15394 837 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 AKAP3O75969 853 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 ZNF202O95125 648 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 FAM163BP0C2L3 166 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 DDX6P26196 483 aaKnown RBP eCLIP15.69■□□□□ 0.1
USB1-210ENST00000565151 ORC1Q13415 861 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 NCOA4Q13772 614 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 ZNF268Q14587 947 aaPredicted RBP15.69■□□□□ 0.1
USB1-210ENST00000565151 ZACNQ401N2 412 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 ZCWPW2Q504Y3 356 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 VSTM1Q6UX27 236 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 SV2AQ7L0J3 742 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 B3GALNT2Q8NCR0 500 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 GOLGA5Q8TBA6 731 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 MRPS31Q92665 395 aaKnown RBP15.69■□□□□ 0.1
USB1-210ENST00000565151 EZH1Q92800 747 aaPredicted RBP15.69■□□□□ 0.1
USB1-210ENST00000565151 TTLL2Q9BWV7 592 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 RNF38Q9H0F5 515 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms