RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-213	ENST00000564757	C18orf8	Q96DM3	657 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	SLC46A1	Q96NT5	459 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	TRIB1	Q96RU8	372 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	SPATA5L1	Q9BVQ7	753 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	LSM14B	Q9BX40	385 aa	Known RBP	4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	TLR10	Q9BXR5	811 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	TM7SF3	Q9NS93	570 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	AGAP1	Q9UPQ3	857 aa		4.23	□□□□□ -1.73
SCAPER-213	ENST00000564757	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	AQP12B	A6NM10	295 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	DRGX	A6NNA5	263 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	CLCA1	A8K7I4	914 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	LGALS16	A8MUM7	142 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	TRIM38	O00635	465 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PIP5K1B	O14986	540 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	AREL1	O15033	823 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	IRAK2	O43187	625 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	EIF5B	O60841	1220 aa	Known RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	FAM20B	O75063	409 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PPFIA4	O75335	1185 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	RASAL1	O95294	804 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	CYP2C9	P11712	490 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	HSD3B1	P14060	373 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	IL1R1	P14778	569 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	CD53	P19397	219 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PDIA3	P30101	505 aa	Known RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	MAN2A2	P49641	1150 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PPFIA1	Q13136	1202 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	TOB2	Q14106	344 aa	Predicted RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	ARHGEF7	Q14155	803 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	RAB30	Q15771	203 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	TAF12	Q16514	161 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	TIGD6	Q17RP2	521 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PREPL	Q4J6C6	727 aa	Predicted RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PLA1A	Q53H76	456 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	NOMO2	Q5JPE7	1267 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	FOXR2	Q6PJQ5	311 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	RFX8	Q6ZV50	586 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	ANKRD18A	Q8IVF6	992 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	NUP133	Q8WUM0	1156 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	HAS1	Q92839	578 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	TBC1D20	Q96BZ9	403 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	MARS2	Q96GW9	593 aa	Known RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	SNX27	Q96L92	541 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PNKP	Q96T60	521 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PRPF18	Q99633	342 aa	Known RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	FAM167B	Q9BTA0	163 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	ISCA1	Q9BUE6	129 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	RIOX1	Q9H6W3	641 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	GRHPR	Q9UBQ7	328 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	HESX1	Q9UBX0	185 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	ZNHIT2	Q9UHR6	403 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	PNMA2	Q9UL42	364 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	SHOC2	Q9UQ13	582 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	ATP11B	Q9Y2G3	1177 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	MTO1	Q9Y2Z2	717 aa	Known RBP	4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757	RAD54B	Q9Y620	910 aa		4.22	□□□□□ -1.73
SCAPER-213	ENST00000564757		H7C4K7	107 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	TOR1B	O14657	336 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	RHOBTB3	O94955	611 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	SPATA31D3	P0C874	917 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	VIPR2	P41587	438 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	PTDSS1	P48651	473 aa	Known RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	CPT1A	P50416	773 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	PRKAG1	P54619	331 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	WNT3	P56703	355 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	C21orf58	P58505	322 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	ANKRD45	Q5TZF3	282 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	TAPT1	Q6NXT6	567 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	CRTC1	Q6UUV9	634 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	ZDHHC24	Q6UX98	284 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	MMS22L	Q6ZRQ5	1243 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	SPATA31D4	Q6ZUB0	917 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	GPRIN1	Q7Z2K8	1008 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	GATAD2A	Q86YP4	633 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	VRK3	Q8IV63	474 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	CACNA2D3	Q8IZS8	1091 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	CFAP52	Q8N1V2	620 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	NSUN7	Q8NE18	718 aa	Known RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	OR52N2	Q8NGI0	321 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	MIEF2	Q96C03	454 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	GCC1	Q96CN9	775 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	SORBS1	Q9BX66	1292 aa	Known RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	CPEB1	Q9BZB8	566 aa	Known RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	MAGEH1	Q9H213	219 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	RGL1	Q9NZL6	768 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	FAM30A	Q9NZY2	134 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	RNF181	Q9P0P0	153 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	EIF2B4	Q9UI10	523 aa	Known RBP	4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	ANAPC4	Q9UJX5	808 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757	LZTS1	Q9Y250	596 aa		4.21	□□□□□ -1.74
SCAPER-213	ENST00000564757		E9PLN8	166 aa		4.2	□□□□□ -1.74
SCAPER-213	ENST00000564757	ACKR2	O00590	384 aa		4.2	□□□□□ -1.74
SCAPER-213	ENST00000564757	NPC1	O15118	1278 aa		4.2	□□□□□ -1.74
SCAPER-213	ENST00000564757	COQ9	O75208	318 aa		4.2	□□□□□ -1.74
SCAPER-213	ENST00000564757	PIAS2	O75928	621 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms