RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 ATG4AQ8WYN0 398 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 USP6NLQ92738 828 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 STMN2Q93045 179 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 MCUR1Q96AQ8 359 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 TBC1D31Q96DN5 1066 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 BTBD6Q96KE9 485 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 MCEEQ96PE7 176 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 POP1Q99575 1024 aaKnown RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 DDX23Q9BUQ8 820 aaKnown RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 VCX3BQ9H321 246 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 STN1Q9H668 368 aaKnown RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 RPF1Q9H9Y2 349 aaKnown RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 XPNPEP1Q9NQW7 623 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 AAASQ9NRG9 546 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 MRGBPQ9NV56 204 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 TBK1Q9UHD2 729 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 ZFP69BQ9UJL9 534 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF180Q9UJW8 692 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 POLIQ9UNA4 740 aa8□□□□□ -1.13
ATXN3-249ENST00000564606 EPB41L3Q9Y2J2 1087 aaPredicted RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 DYNC1LI1Q9Y6G9 523 aaKnown RBP8□□□□□ -1.13
ATXN3-249ENST00000564606 IGKV6D-21A0A0A0MT36 114 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 TCRBV7S2A1N4TA0A589 114 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 MOXD2PA6NHM9 499 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 TISP43B9A030 160 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 E7ESA3 106 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 AP3B1O00203 1094 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 NOP56O00567 594 aaKnown RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ACKR2O00590 384 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PRPSAP2O60256 369 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF862O60290 1169 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CIB2O75838 187 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 FAM155BO75949 473 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ANP32DO95626 131 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 STAU1O95793 577 aaKnown RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 IFNB1P01574 187 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PRKCBP05771 671 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CYP2C8P10632 490 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 SKIP12755 728 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CD19P15391 556 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PECAM1P16284 738 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CD58P19256 250 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CALB2P22676 271 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 GLRA2P23416 452 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CHKAP35790 457 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 GJC1P36383 396 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CDKN2BP42772 138 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PHKA2P46019 1235 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CTCFP49711 727 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ACOT2P49753 483 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 VPS41P49754 854 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 NLRP11P59045 1033 aaKnown RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 MYL6P60660 151 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 MRPS35P82673 323 aaKnown RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF200P98182 395 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CDK16Q00536 496 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 KRT72Q14CN4 511 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 LRRC14Q15048 493 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PCBP1Q15365 356 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 OASLQ15646 514 aaKnown RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CCDC6Q16204 474 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 DNAL1Q4LDG9 190 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 TTC39BQ5VTQ0 682 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 KAZNQ674X7 775 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CDCA2Q69YH5 1023 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 METTL7BQ6UX53 244 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 MFSD7Q6UXD7 560 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 C3orf62Q6ZUJ4 267 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 RFX6Q8HWS3 928 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CDKL3Q8IVW4 592 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CCDC60Q8IWA6 550 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ZDHHC14Q8IZN3 488 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 SMC1BQ8NDV3 1235 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 SLC35B2Q8TB61 432 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 DENND1AQ8TEH3 1009 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CDKL2Q92772 493 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 HLA-CQ95604 372 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ATG4CQ96DT6 458 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 C9orf72Q96LT7 481 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ADPGKQ9BRR6 497 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 NAT9Q9BTE0 207 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PI4K2AQ9BTU6 479 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 TARS2Q9BW92 718 aaKnown RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 NFKBIZQ9BYH8 718 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 WWP1Q9H0M0 922 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 IKZF4Q9H2S9 585 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 SMARCAD1Q9H4L7 1026 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 MANSC1Q9H8J5 431 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CD248Q9HCU0 757 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PNPLA8Q9NP80 782 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 TOPORSQ9NS56 1045 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 CISHQ9NSE2 258 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 EURLQ9NYK6 297 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms