RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 PSMD2Q13200 908 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 GAS6Q14393 721 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 MTF1Q14872 753 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 E2F4Q16254 413 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 FOXD4L6Q3SYB3 417 aaPredicted RBP10.21□□□□□ -0.77
CLN6-203ENST00000563917 TMEM196Q5HYL7 178 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 TRIM68Q6AZZ1 485 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 FOXD4L3Q6VB84 417 aaPredicted RBP10.21□□□□□ -0.77
CLN6-203ENST00000563917 Q6ZS52 159 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 DENND5BQ6ZUT9 1274 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 OSTM1Q86WC4 334 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 NELFCDQ8IXH7 590 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 OR5B17Q8NGF7 314 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 OR6B3Q8NGW1 331 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 ZNF507Q8TCN5 953 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 OSCP1Q8WVF1 389 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 HPS3Q969F9 1004 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 SPATA17Q96L03 361 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 P2RY13Q9BPV8 354 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 RTKNQ9BST9 563 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 AGPAT3Q9NRZ7 376 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 CCL26Q9Y258 94 aa10.21□□□□□ -0.77
CLN6-203ENST00000563917 ATP8B3O60423 1300 aa10.21□□□□□ -0.78
CLN6-203ENST00000563917 COL4A2P08572 1712 aa10.21□□□□□ -0.78
CLN6-203ENST00000563917 OTOGLQ3ZCN5 2332 aa10.21□□□□□ -0.78
CLN6-203ENST00000563917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 CCDC163A0A0D9SF12 145 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 PVALEFA0A1B0GWK0 134 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 A8MXQ7 604 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 CLIC2O15247 247 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ABL1P00519 1130 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 P4HA1P13674 534 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 WARSP23381 471 aaKnown RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 BDNFP23560 247 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ATICP31939 592 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 AFMP43652 599 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 AP3M2P53677 418 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 BIRC3Q13489 604 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 PSMD6Q15008 389 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 WDR72Q3MJ13 1102 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 TDRD10Q5VZ19 366 aaKnown RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 CNNM4Q6P4Q7 775 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 FAM171BQ6P995 826 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 TMEM150AQ86TG1 271 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 WDR5BQ86VZ2 330 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 CAMKK1Q8N5S9 505 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ARL14EPQ8N8R7 260 aaPredicted RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 STKLD1Q8NE28 680 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 MYCBPAPQ8TBZ2 947 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 NETO1Q8TDF5 533 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 SH3RF2Q8TEC5 729 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 CD101Q93033 1021 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 SNX21Q969T3 373 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 MYLPFQ96A32 169 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 CCDC47Q96A33 483 aaKnown RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 SYAP1Q96A49 352 aaPredicted RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 ACDQ96AP0 544 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 SLITRK1Q96PX8 696 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 CGRRF1Q99675 332 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ELOVL4Q9GZR5 314 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ECT2Q9H8V3 914 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 HPS4Q9NQG7 708 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 NXF1Q9UBU9 619 aaKnown RBP10.2□□□□□ -0.78
CLN6-203ENST00000563917 MYO15AQ9UKN7 3530 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 ZNF292O60281 2723 aa10.2□□□□□ -0.78
CLN6-203ENST00000563917 K7ESF4 209 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 SLC9A3R1O14745 358 aaPredicted RBP10.19□□□□□ -0.78
CLN6-203ENST00000563917 HRO43593 1189 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 RNF40O75150 1001 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 ATP2C2O75185 946 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 TACC1O75410 805 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 RPP40O75818 363 aaKnown RBP10.19□□□□□ -0.78
CLN6-203ENST00000563917 KIF20AO95235 890 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 F13A1P00488 732 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 ARSAP15289 507 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 LMO2P25791 158 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 GJA4P35212 333 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 GALK1P51570 392 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 CYP24A1Q07973 514 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 CSRP2Q16527 193 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 KNOP1Q1ED39 458 aaKnown RBP10.19□□□□□ -0.78
CLN6-203ENST00000563917 MDH1BQ5I0G3 518 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 SHC4Q6S5L8 630 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 CACNA2D4Q7Z3S7 1137 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 DDX42Q86XP3 938 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLN6-203ENST00000563917 C12orf50Q8NA57 414 aaPredicted RBP10.19□□□□□ -0.78
CLN6-203ENST00000563917 GLIS3Q8NEA6 775 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 CXorf38Q8TB03 319 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 KBTBD7Q8WVZ9 684 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 PCED1BQ96HM7 432 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 FAM84AQ96KN4 292 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 CYP2S1Q96SQ9 504 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 PKMYT1Q99640 499 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 DNAI2Q9GZS0 605 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 BLZF1Q9H2G9 400 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 SLC39A2Q9NP94 309 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 SEMA4GQ9NTN9 838 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 EXOC1Q9NV70 894 aa10.19□□□□□ -0.78
CLN6-203ENST00000563917 ARHGAP26Q9UNA1 814 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms