RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 HMGA1P17096 107 aaKnown RBP17.16■□□□□ 0.34
RNF40-205ENST00000563909 PROZP22891 400 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 RPA1P27694 616 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 DDIT3P35638 169 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 MRPS21P82921 87 aaKnown RBP17.16■□□□□ 0.34
RNF40-205ENST00000563909 TMPRSS7Q7RTY8 843 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 MARCH9Q86YJ5 346 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 ZNF843Q8N446 348 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 C4orf32Q8N8J7 132 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 PIP4K2CQ8TBX8 421 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 ZBTB45Q96K62 511 aaPredicted RBP17.16■□□□□ 0.34
RNF40-205ENST00000563909 ZNF396Q96N95 335 aaPredicted RBP17.16■□□□□ 0.34
RNF40-205ENST00000563909 DCBLD2Q96PD2 775 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 CYP2S1Q96SQ9 504 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 LINC00597Q9H2U6 94 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 PCDH15Q96QU1 1955 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 PHLPP2Q6ZVD8 1323 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 ZNF638Q14966 1978 aaKnown RBP17.15■□□□□ 0.34
RNF40-205ENST00000563909 CITO14578 2027 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 GJB3O75712 270 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ODC1P11926 461 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 OPRD1P41143 372 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ABCG1P45844 678 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 PEX3P56589 373 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ZNF33AQ06730 810 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ZNF77Q15935 545 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 IL17RCQ8NAC3 791 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
RNF40-205ENST00000563909 PNMA5Q96PV4 448 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ZCWPW1Q9H0M4 648 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 TRPC7Q9HCX4 862 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 KIAA1522Q9P206 1035 aaPredicted RBP17.15■□□□□ 0.34
RNF40-205ENST00000563909 MAGED2Q9UNF1 606 aaPredicted RBP17.15■□□□□ 0.34
RNF40-205ENST00000563909 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
RNF40-205ENST00000563909 J3QKU1 62 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.33
RNF40-205ENST00000563909 TIE1P35590 1138 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 PRPHP41219 470 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 NPTX2P47972 431 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 ATP2C1P98194 919 aaPredicted RBP17.14■□□□□ 0.33
RNF40-205ENST00000563909 SF3A1Q15459 793 aaKnown RBP17.14■□□□□ 0.33
RNF40-205ENST00000563909 ARL6IP4Q66PJ3 421 aaKnown RBP17.14■□□□□ 0.33
RNF40-205ENST00000563909 TAS1R3Q7RTX0 852 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 GLRX5Q86SX6 157 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 SFTPA1Q8IWL2 248 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 SENP8Q96LD8 212 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 SLC22A12Q96S37 553 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 TMEM134Q9H6X4 195 aa17.14■□□□□ 0.33
RNF40-205ENST00000563909 PTPRBP23467 1997 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 TCRBV21S2A2A0A5A6 115 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 PPEF2O14830 753 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 CBFA2T3O75081 653 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 NFATC1O95644 943 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 CKMP06732 381 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 CXCL8P10145 99 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 LILRA4P59901 499 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 ZBTB6Q15916 424 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 PLEKHG6Q3KR16 790 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 EOGTQ5NDL2 527 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 EMC10Q5UCC4 262 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 STKLD1Q8NE28 680 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
RNF40-205ENST00000563909 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 ZDHHC4Q9NPG8 344 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 ABI2Q9NYB9 513 aaPredicted RBP17.13■□□□□ 0.33
RNF40-205ENST00000563909 PCOLCE2Q9UKZ9 415 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
RNF40-205ENST00000563909 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
RNF40-205ENST00000563909 A0A1W2PQD8 194 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 CYP3A5P20815 502 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 MUTP22033 750 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
RNF40-205ENST00000563909 USP4Q13107 963 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 PDIA5Q14554 519 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
RNF40-205ENST00000563909 HAUS3Q68CZ6 603 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 LRRTM3Q86VH5 581 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 LURAP1LQ8IV03 231 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 LSM14AQ8ND56 463 aaKnown RBP17.12■□□□□ 0.33
RNF40-205ENST00000563909 SPPL2BQ8TCT7 592 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 C2orf15Q8WU43 125 aaKnown RBP17.12■□□□□ 0.33
RNF40-205ENST00000563909 USP28Q96RU2 1077 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 PLEKHA5Q9HAU0 1116 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
RNF40-205ENST00000563909 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 UNC79Q9P2D8 2635 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 TRAV19A0A0A6YYK7 116 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 ADAM23O75077 832 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 TOM1L1O75674 476 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 ITPKBP27987 946 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms