RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 MAGEC2Q9UBF1 373 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-205ENST00000562707 SRPRBQ9Y5M8 271 aaKnown RBP17.77■□□□□ 0.44
CMTM3-205ENST00000562707 CLIC4Q9Y696 253 aa17.77■□□□□ 0.44
CMTM3-205ENST00000562707 NUP210Q8TEM1 1887 aaPredicted RBP17.77■□□□□ 0.43
CMTM3-205ENST00000562707 CACNA1BQ00975 2339 aa17.77■□□□□ 0.43
CMTM3-205ENST00000562707 CAVIN2O95810 425 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 GBP1P32455 592 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 MAGEA11P43364 429 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 DGKEP52429 567 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 CREB5Q02930 508 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 FAM171BQ6P995 826 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 C11orf74Q86VG3 221 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 TSTD1Q8NFU3 115 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 CXorf38Q8TB03 319 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 EZH1Q92800 747 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-205ENST00000562707 CBWD1Q9BRT8 395 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 LSM14BQ9BX40 385 aaKnown RBP17.76■□□□□ 0.43
CMTM3-205ENST00000562707 PCIF1Q9H4Z3 704 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 GCNT4Q9P109 453 aa17.76■□□□□ 0.43
CMTM3-205ENST00000562707 FBXO2Q9UK22 296 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-205ENST00000562707 C2orf78A6NCI8 922 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 DCLK1O15075 740 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 KCNK5O95279 499 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 NFATC1O95644 943 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 TNNC2P02585 160 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 TCF3P15923 654 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 CASP5P51878 434 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 SURF1Q15526 300 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 MAPRE1Q15691 268 aaKnown RBP17.75■□□□□ 0.43
CMTM3-205ENST00000562707 SOWAHAQ2M3V2 549 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 USP39Q53GS9 565 aaKnown RBP17.75■□□□□ 0.43
CMTM3-205ENST00000562707 VSTM1Q6UX27 236 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 GPD1LQ8N335 351 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 HPDLQ96IR7 371 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 MTMR12Q9C0I1 747 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 LINC00597Q9H2U6 94 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 EHD2Q9NZN4 543 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 TRPM5Q9NZQ8 1165 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 SIX4Q9UIU6 781 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 CDH9Q9ULB4 789 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 ARHGAP26Q9UNA1 814 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 TSC2P49815 1807 aa17.75■□□□□ 0.43
CMTM3-205ENST00000562707 KIAA0391O15091 583 aaKnown RBP17.74■□□□□ 0.43
CMTM3-205ENST00000562707 HCRTO43612 131 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 ATP2C2O75185 946 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 PFKLP17858 780 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 PDCP20941 246 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 ANXA13P27216 316 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 GRIK1P39086 918 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 STAT6P42226 847 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 SHC2P98077 582 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 CCDC142Q17RM4 750 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 SCARA3Q6AZY7 606 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 TCEAL6Q6IPX3 200 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 STXBP4Q6ZWJ1 553 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 TCEAL3Q969E4 200 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 FAM84AQ96KN4 292 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 SPATA17Q96L03 361 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 CEP295NLQ96MC4 621 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 CLIC6Q96NY7 704 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 EDEM2Q9BV94 578 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 INTS13Q9NVM9 706 aa17.74■□□□□ 0.43
CMTM3-205ENST00000562707 SCN1AP35498 2009 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 BCLAF3A2AJT9 711 aaKnown RBP17.73■□□□□ 0.43
CMTM3-205ENST00000562707 ZNF233A6NK53 670 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 PRPF6O94906 941 aaKnown RBP17.73■□□□□ 0.43
CMTM3-205ENST00000562707 BDNFP23560 247 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 LMO2P25791 158 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 PSMC1P62191 440 aaKnown RBP17.73■□□□□ 0.43
CMTM3-205ENST00000562707 DUOXA2Q1HG44 320 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 DAB2IPQ5VWQ8 1189 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 LMBRD2Q68DH5 695 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-205ENST00000562707 DENND5BQ6ZUT9 1274 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 CCDC65Q8IXS2 484 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 USP33Q8TEY7 942 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 MYLPFQ96A32 169 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 MMS19Q96T76 1030 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 INVSQ9Y283 1065 aa17.73■□□□□ 0.43
CMTM3-205ENST00000562707 C4orf47A7E2U8 309 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 LEFTY2O00292 366 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 PDGFRBP09619 1106 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 PPP3CCP48454 512 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 SEC13P55735 322 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 CYP27A1Q02318 531 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 CEBPZQ03701 1054 aaKnown RBP17.72■□□□□ 0.43
CMTM3-205ENST00000562707 C2orf27AQ580R0 203 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 PSAPL1Q6NUJ1 521 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 OR5B17Q8NGF7 314 aa17.72■□□□□ 0.43
CMTM3-205ENST00000562707 FRMD3A2A2Y4 597 aa17.71■□□□□ 0.43
CMTM3-205ENST00000562707 K7EQS6 105 aa17.71■□□□□ 0.43
CMTM3-205ENST00000562707 KHNYNO15037 678 aaKnown RBP17.71■□□□□ 0.43
CMTM3-205ENST00000562707 WARSP23381 471 aaKnown RBP17.71■□□□□ 0.43
CMTM3-205ENST00000562707 OPRD1P41143 372 aa17.71■□□□□ 0.43
CMTM3-205ENST00000562707 ANO7Q6IWH7 933 aa17.71■□□□□ 0.43
CMTM3-205ENST00000562707 LIMS2Q7Z4I7 341 aa17.71■□□□□ 0.43
CMTM3-205ENST00000562707 KBTBD7Q8WVZ9 684 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms