RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CYP2J2P51589 502 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 AQP4P55087 323 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 ACTR3P61158 418 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 MESDQ14696 234 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TRMT5Q32P41 509 aaKnown RBP14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 NADK2Q4G0N4 442 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 C1orf146Q5VVC0 180 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 LPCAT4Q643R3 524 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TSHZ1Q6ZSZ6 1077 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 ATP11CQ8NB49 1132 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 MRRFQ96E11 262 aaKnown RBP14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TTC25Q96NG3 672 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TBCCD1Q9NVR7 557 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 ZDHHC7Q9NXF8 308 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 ARHGEF35A5YM69 484 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 PDXKO00764 312 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 CLPTM1O96005 669 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 HOXA7P31268 230 aaPredicted RBP14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 NR1H3Q13133 447 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 MSLNQ13421 630 aaPredicted RBP14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 MAP7D1Q3KQU3 841 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 NUP93Q8N1F7 819 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 ZFP28Q8NHY6 868 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 FIZ1Q96SL8 496 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TRIM55Q9BYV6 548 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 DNAJB4Q9UDY4 337 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 TELO2Q9Y4R8 837 aa14.69□□□□□ -0.06
GTF3C1-203ENST00000562609 ANKRD62A6NC57 917 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 C2orf71A6NGG8 1288 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 FZD9O00144 591 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 CALUO43852 315 aaPredicted RBP14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 MAGEC1O60732 1142 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 IVDP26440 423 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 BAATQ14032 418 aaPredicted RBP14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 UGCGQ16739 394 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 B3GNT9Q6UX72 402 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 DAW1Q8N136 415 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 SKA1Q96BD8 255 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 THTPAQ9BU02 230 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 HEY1Q9Y5J3 304 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 MYH11P35749 1972 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 C15orf38-AP3S2A0A0A6YYH1 394 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 VWA5AO00534 786 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 NDC80O14777 642 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 ATMINO43313 823 aaPredicted RBP14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 STRNO43815 780 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 TNFAIP3P21580 790 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 RPS12P25398 132 aaKnown RBP14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 SOX5P35711 763 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 ADCY8P40145 1251 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 CCR3P51677 355 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 BACE1P56817 501 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 PGM5Q15124 567 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 PADI6Q6TGC4 694 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 UGT2A3Q6UWM9 527 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 ARPINQ7Z6K5 226 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 TRIM50Q86XT4 487 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 METTL25Q8N6Q8 603 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 MPHOSPH6Q99547 160 aaKnown RBP14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 GPRC5CQ9NQ84 441 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 GGA3Q9NZ52 723 aa14.68□□□□□ -0.06
GTF3C1-203ENST00000562609 SLC26A4O43511 780 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ADCY3O60266 1144 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ATF2P15336 505 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 PTPRAP18433 802 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 HALP42357 657 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 CDK16Q00536 496 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 PPIDQ08752 370 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 KRT72Q14CN4 511 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 SGO2Q562F6 1265 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ZNF720Q7Z2F6 126 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 FRMD5Q7Z6J6 570 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 CPNE8Q86YQ8 564 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 AGAP3Q96P47 875 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 TMEM120AQ9BXJ8 343 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 GRIP2Q9C0E4 1043 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 PCIF1Q9H4Z3 704 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 AGO4Q9HCK5 861 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ARHGEF4Q9NR80 690 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 OLFML3Q9NRN5 406 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 SLC7A8Q9UHI5 535 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 FAF1Q9UNN5 650 aaPredicted RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 GCAP28676 217 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 SLC18A1P54219 525 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 NCOA4Q13772 614 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 HSP90AA5PQ58FG0 334 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 C11orf63Q6NUN7 778 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 MCF2L2Q86YR7 1114 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 TMPRSS6Q8IU80 811 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 RHOT2Q8IXI1 618 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ULK2Q8IYT8 1036 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 RBM15BQ8NDT2 890 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 RIN3Q8TB24 985 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 DQX1Q8TE96 717 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 ATG4AQ8WYN0 398 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms