RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ACSF2Q96CM8 615 aaPredicted RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 CYFIP2Q96F07 1278 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 THUMPD3Q9BV44 507 aaKnown RBP11.68□□□□□ -0.54
RPAP1-204ENST00000562303 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 CIPCQ9C0C6 399 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 OSGEPL1Q9H4B0 414 aa11.68□□□□□ -0.54
RPAP1-204ENST00000562303 A0A1B0GW55 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4L2P0CJ85 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4L3P0CJ86 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4L4P0CJ87 422 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4L5P0CJ88 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4L6P0CJ89 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4L7P0CJ90 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DPYDQ12882 1025 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 RDM1Q8NG50 284 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CERKQ8TCT0 537 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CCDC3Q9BQI4 270 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 THTPAQ9BU02 230 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DUX4Q9UBX2 424 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 VPS28Q9UK41 221 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 SSU72P8A0A1W2PR75 194 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CYB561D2O14569 222 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 GAS2O43903 313 aaKnown RBP11.67□□□□□ -0.54
RPAP1-204ENST00000562303 FDFT1P37268 417 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CLK1P49759 484 aaKnown RBP11.67□□□□□ -0.54
RPAP1-204ENST00000562303 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
RPAP1-204ENST00000562303 SEZ6Q53EL9 994 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF484Q5JVG2 852 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 PPIL6Q8IXY8 311 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CHP1Q99653 195 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 TBX20Q9UMR3 447 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 TGM2P21980 687 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 NUMBP49757 651 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 ITGA8P53708 1063 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 AMPD2Q01433 879 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CENPCQ03188 943 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 ORC1Q13415 861 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
RPAP1-204ENST00000562303 ANKRD49Q8WVL7 239 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 RUBCNQ92622 972 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 PBRM1Q86U86 1689 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 TRPC5OSA6NMA1 111 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 PLOD1Q02809 727 aaPredicted RBP11.67□□□□□ -0.54
RPAP1-204ENST00000562303 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 FUT11Q495W5 492 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 BOLA3Q53S33 107 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 AGAP9Q5VTM2 703 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DENND5BQ6ZUT9 1274 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 DEFB128Q7Z7B8 93 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 SGSM3Q96HU1 749 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 ALDH8A1Q9H2A2 487 aaPredicted RBP11.67□□□□□ -0.54
RPAP1-204ENST00000562303 PALMDQ9NP74 551 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
RPAP1-204ENST00000562303 ZBTB39O15060 712 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 P4HA2O15460 535 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 CKBP12277 381 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MYL4P12829 197 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 DNAJB2P25686 324 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 PLIN5Q00G26 463 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 STK4Q13043 487 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 USP39Q53GS9 565 aaKnown RBP11.66□□□□□ -0.54
RPAP1-204ENST00000562303 FGD2Q7Z6J4 655 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MYO1HQ8N1T3 1032 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 TUBE1Q9UJT0 475 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 APPL1Q9UKG1 709 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 PLA2G4CQ9UP65 541 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 PCDHB12Q9Y5F1 795 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 PCDH8O95206 1070 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 FYNP06241 537 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MUTP22033 750 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 KRT20P35900 424 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 RHOAP61586 193 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 EFEMP1Q12805 493 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 OTOAQ7RTW8 1153 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 TMC7Q7Z402 723 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 VN1R5Q7Z5H4 357 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 JAMLQ86YT9 394 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 HERC6Q8IVU3 1022 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 IMPAD1Q9NX62 359 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MTO1Q9Y2Z2 717 aaKnown RBP11.66□□□□□ -0.54
RPAP1-204ENST00000562303 RNF103O00237 685 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 RHOCP08134 193 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 CUL2Q13617 745 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 ACOT1Q86TX2 421 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 RIN3Q8TB24 985 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 HASPINQ8TF76 798 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 WDR41Q9HAD4 459 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 TMEM253P0C7T8 217 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 ITGALP20701 1170 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 RPA1P27694 616 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MDH1P40925 334 aaKnown RBP11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MAPK9P45984 424 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 TIGD7Q6NT04 549 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms