RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 OASLQ15646 514 aaKnown RBP11.52□□□□□ -0.57
NEIL1-202ENST00000561643 MAPK6Q16659 721 aa11.52□□□□□ -0.57
NEIL1-202ENST00000561643 SMTNL2Q2TAL5 461 aa11.52□□□□□ -0.57
NEIL1-202ENST00000561643 THNSL1Q8IYQ7 743 aa11.52□□□□□ -0.57
NEIL1-202ENST00000561643 RMDN2Q96LZ7 410 aa11.52□□□□□ -0.57
NEIL1-202ENST00000561643 SMC6Q96SB8 1091 aa11.52□□□□□ -0.57
NEIL1-202ENST00000561643 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.57
NEIL1-202ENST00000561643 NXF1Q9UBU9 619 aaKnown RBP11.52□□□□□ -0.57
NEIL1-202ENST00000561643 TCRBV5S1A1TA0A578 114 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 EIF4BP23588 611 aaKnown RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 PSMC4P43686 418 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 WDR4P57081 412 aaKnown RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 WDR72Q3MJ13 1102 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 GALNTL6Q49A17 601 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 APOBEC3FQ8IUX4 373 aaKnown RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 C4orf33Q8N1A6 199 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 GALNT15Q8N3T1 639 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 LRRC71Q8N4P6 559 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 WDTC1Q8N5D0 677 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 FITM2Q8N6M3 262 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 ZNF668Q96K58 619 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 ACO2Q99798 780 aaKnown RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 RXFP1Q9HBX9 757 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 PCDH9Q9HC56 1237 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 FAM189A1O60320 539 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 ITGAVP06756 1048 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 GCAP28676 217 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 TPP2P29144 1249 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 BNIP1Q12981 228 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 GRM1Q13255 1194 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 SURF1Q15526 300 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 PKN2Q16513 984 aaKnown RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 RNASEH2BQ5TBB1 312 aaKnown RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 CGB2Q6NT52 195 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 ANKMY2Q8IV38 441 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 SEPT1Q8WYJ6 367 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 NKD2Q969F2 451 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 SAE1Q9UBE0 346 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-202ENST00000561643 PRKAG3Q9UGI9 489 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 STRIP2Q9ULQ0 834 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 SHOC2Q9UQ13 582 aa11.51□□□□□ -0.57
NEIL1-202ENST00000561643 BANF1O75531 89 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 TNNC2P02585 160 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 KRT19P08727 400 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 KRT3P12035 628 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 CA4P22748 312 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 POLR2BP30876 1174 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 RFC1P35251 1148 aaPredicted RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 LAMTOR4Q0VGL1 99 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 SPARCL1Q14515 664 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 KCNT1Q5JUK3 1230 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 RNF220Q5VTB9 566 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 IER5Q5VY09 327 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 DENND1BQ6P3S1 775 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 SYNCQ9H7C4 482 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 SUDS3Q9H7L9 328 aaPredicted RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 C10orf88Q9H8K7 445 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 NDC80O14777 642 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 ALOX15BO15296 676 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 PTPN7P35236 360 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 HIF1AQ16665 826 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 CDR2LQ86X02 465 aaPredicted RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 NCAPG2Q86XI2 1143 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 TDRPQ86YL5 185 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 CPSF3Q9UKF6 684 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 PCDHGC3Q9UN70 934 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 CST8O60676 142 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 ASMTLO95671 621 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 RAP1GAPP47736 663 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 HADHQ16836 314 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 LY6KQ17RY6 165 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 TRIM50Q86XT4 487 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 NIPA2Q8N8Q9 360 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 ANKRD36BP1Q96IX9 119 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 MAF1Q9H063 256 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 SENP1Q9P0U3 644 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 POLIQ9UNA4 740 aa11.5□□□□□ -0.57
NEIL1-202ENST00000561643 SMG5Q9UPR3 1016 aaKnown RBP11.5□□□□□ -0.57
NEIL1-202ENST00000561643 KRT7P08729 469 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 ASPAP45381 313 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
NEIL1-202ENST00000561643 MXD4Q14582 209 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms