RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 RESTQ13127 1097 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 TAF12Q16514 161 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 CCDC142Q17RM4 750 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 SOWAHAQ2M3V2 549 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 EML3Q32P44 896 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 PLK5Q496M5 336 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 DNTTIP2Q5QJE6 756 aaKnown RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 NAIF1Q69YI7 327 aaPredicted RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 SCARA3Q6AZY7 606 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 VSTM1Q6UX27 236 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 KBTBD6Q86V97 674 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 CPA6Q8N4T0 437 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 RASSF8Q8NHQ8 419 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 ACDQ96AP0 544 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 SPATA17Q96L03 361 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 SLC22A12Q96S37 553 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 P2RY13Q9BPV8 354 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 CBWD1Q9BRT8 395 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 FAM213AQ9BRX8 229 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 PI4K2AQ9BTU6 479 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 TTLL2Q9BWV7 592 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 ECT2Q9H8V3 914 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 MRPL44Q9H9J2 332 aaKnown RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 DDX43Q9NXZ2 648 aaKnown RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 RBAKQ9NYW8 714 aaPredicted RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 AGAP1Q9UPQ3 857 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 FAM208BQ5VWN6 2430 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 AXIN1O15169 862 aa9□□□□□ -0.97
PALB2-202ENST00000561514 HUS1O60921 280 aa9□□□□□ -0.97
PALB2-202ENST00000561514 KRT37O76014 449 aa9□□□□□ -0.97
PALB2-202ENST00000561514 APBB3O95704 486 aa9□□□□□ -0.97
PALB2-202ENST00000561514 OLFM2O95897 454 aa9□□□□□ -0.97
PALB2-202ENST00000561514 USP17L7P0C7H9 530 aa9□□□□□ -0.97
PALB2-202ENST00000561514 PDCP20941 246 aa9□□□□□ -0.97
PALB2-202ENST00000561514 MPLP40238 635 aa9□□□□□ -0.97
PALB2-202ENST00000561514 GALK1P51570 392 aa9□□□□□ -0.97
PALB2-202ENST00000561514 RBP5P82980 135 aa9□□□□□ -0.97
PALB2-202ENST00000561514 TFAMQ00059 246 aaKnown RBP9□□□□□ -0.97
PALB2-202ENST00000561514 SF3A2Q15428 464 aaKnown RBP9□□□□□ -0.97
PALB2-202ENST00000561514 DDR2Q16832 855 aa9□□□□□ -0.97
PALB2-202ENST00000561514 GAB4Q2WGN9 574 aa9□□□□□ -0.97
PALB2-202ENST00000561514 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
PALB2-202ENST00000561514 CC2D1AQ6P1N0 951 aaPredicted RBP9□□□□□ -0.97
PALB2-202ENST00000561514 CNNM4Q6P4Q7 775 aa9□□□□□ -0.97
PALB2-202ENST00000561514 CCDC73Q6ZRK6 1079 aa9□□□□□ -0.97
PALB2-202ENST00000561514 SV2BQ7L1I2 683 aa9□□□□□ -0.97
PALB2-202ENST00000561514 DYMQ7RTS9 669 aa9□□□□□ -0.97
PALB2-202ENST00000561514 RASSF3Q86WH2 238 aa9□□□□□ -0.97
PALB2-202ENST00000561514 ADGRF2Q8IZF7 708 aa9□□□□□ -0.97
PALB2-202ENST00000561514 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
PALB2-202ENST00000561514 STKLD1Q8NE28 680 aa9□□□□□ -0.97
PALB2-202ENST00000561514 CACTINQ8WUQ7 758 aaKnown RBP9□□□□□ -0.97
PALB2-202ENST00000561514 CD101Q93033 1021 aa9□□□□□ -0.97
PALB2-202ENST00000561514 ATP2A3Q93084 1043 aa9□□□□□ -0.97
PALB2-202ENST00000561514 EXOC4Q96A65 974 aa9□□□□□ -0.97
PALB2-202ENST00000561514 SAAL1Q96ER3 474 aa9□□□□□ -0.97
PALB2-202ENST00000561514 FGFBP2Q9BYJ0 223 aa9□□□□□ -0.97
PALB2-202ENST00000561514 MTMR12Q9C0I1 747 aa9□□□□□ -0.97
PALB2-202ENST00000561514 DUSP15Q9H1R2 295 aaPredicted RBP9□□□□□ -0.97
PALB2-202ENST00000561514 ARRDC1-AS1Q9H2J1 176 aa9□□□□□ -0.97
PALB2-202ENST00000561514 VPS45Q9NRW7 570 aa9□□□□□ -0.97
PALB2-202ENST00000561514 RXFP3Q9NSD7 469 aa9□□□□□ -0.97
PALB2-202ENST00000561514 INTS13Q9NVM9 706 aa9□□□□□ -0.97
PALB2-202ENST00000561514 CCDC39Q9UFE4 941 aa9□□□□□ -0.97
PALB2-202ENST00000561514 SLC8A2Q9UPR5 921 aa9□□□□□ -0.97
PALB2-202ENST00000561514 CLIC4Q9Y696 253 aa9□□□□□ -0.97
PALB2-202ENST00000561514 PTPRJQ12913 1337 aa9□□□□□ -0.97
PALB2-202ENST00000561514 SDK1Q7Z5N4 2213 aa9□□□□□ -0.97
PALB2-202ENST00000561514 A0A087X0B3 334 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 TRAV19A0A0A6YYK7 116 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 HCRTO43612 131 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 GCNT3O95395 438 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 FAM163BP0C2L3 166 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 WARSP23381 471 aaKnown RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 ACAT1P24752 427 aaKnown RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 OPRD1P41143 372 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 PXNP49023 591 aaPredicted RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 PDE6CP51160 858 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 CDR1P51861 262 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 SLC7A9P82251 487 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 ZXDBP98169 803 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 MAPRE1Q15691 268 aaKnown RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 AASDHQ4L235 1098 aaPredicted RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 RRAGBQ5VZM2 374 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 C4orf50Q6ZRC1 276 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 CREBRFQ8IUR6 639 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 GPD1LQ8N335 351 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 CCDC26Q8TAB7 109 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 SH3RF2Q8TEC5 729 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 FAM84AQ96KN4 292 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 CLIC6Q96NY7 704 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 HHIPQ96QV1 700 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 DUSP9Q99956 384 aaKnown RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 SYT15Q9BQS2 421 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 LSM14BQ9BX40 385 aaKnown RBP8.99□□□□□ -0.97
PALB2-202ENST00000561514 PDE11AQ9HCR9 933 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 CRTAC1Q9NQ79 661 aa8.99□□□□□ -0.97
PALB2-202ENST00000561514 POLR3BQ9NW08 1133 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms