RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RAD23BP54727 409 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 CDH8P55286 799 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 NOMO3P69849 1222 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 CBX2Q14781 532 aaPredicted RBP7.98□□□□□ -1.13
TPM1-231ENST00000561395 MEI1Q5TIA1 1274 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 NAA35Q5VZE5 725 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 PPP1R2P3Q6NXS1 205 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 MON1BQ7L1V2 547 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 SLFN11Q7Z7L1 901 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 PASD1Q8IV76 773 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 SYCE1Q8N0S2 351 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 TTC39CQ8N584 583 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 SLC4A11Q8NBS3 891 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 LRRN4CLQ8ND94 238 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 MNS1Q8NEH6 495 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 SLC35G2Q8TBE7 412 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 WHAMMQ8TF30 809 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 ZNF653Q96CK0 615 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 TRIM11Q96F44 468 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 MSLNLQ96KJ4 702 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 ZNF560Q96MR9 790 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 ZSWIM1Q9BR11 485 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 CARD6Q9BX69 1037 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 TLR10Q9BXR5 811 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 PDCL3Q9H2J4 239 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 IGFLR1Q9H665 355 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 OSGEPQ9NPF4 335 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 AVENQ9NQS1 362 aaPredicted RBP7.98□□□□□ -1.13
TPM1-231ENST00000561395 RNF19AQ9NV58 838 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 HMGXB4Q9UGU5 601 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 PUF60Q9UHX1 559 aaKnown RBP7.98□□□□□ -1.13
TPM1-231ENST00000561395 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 GIT1Q9Y2X7 761 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 HYOU1Q9Y4L1 999 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 SAR1BQ9Y6B6 198 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 ACACBO00763 2458 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 FRYLO94915 3013 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 TSC2P49815 1807 aa7.98□□□□□ -1.13
TPM1-231ENST00000561395 FNDC1Q4ZHG4 1894 aaPredicted RBP7.98□□□□□ -1.13
TPM1-231ENST00000561395 FAM170AA1A519 330 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 MEIS3P2A8K0S8 358 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 DYNC1I1O14576 645 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 GRM6O15303 877 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 BUB1BO60566 1050 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 ZNF623O75123 536 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 UPP2O95045 317 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 PDGFBP01127 241 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 MYBL1P10243 752 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 SKIP12755 728 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 PRLRP16471 622 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 ATF7P17544 494 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 TCP1P17987 556 aaKnown RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 LRPAP1P30533 357 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 CDH5P33151 784 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 MLH1P40692 756 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 PNPLA4P41247 253 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 SOX4Q06945 474 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 SV2CQ496J9 727 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 ZNF394Q53GI3 561 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 C11orf63Q6NUN7 778 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 LIMS2Q7Z4I7 341 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 DAAM2Q86T65 1068 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 PHF13Q86YI8 300 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 MCOLN2Q8IZK6 566 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 CEP112Q8N8E3 955 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 SMRP1Q8NCR6 262 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 DBF4BQ8NFT6 615 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 ZNF606Q8WXB4 792 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 CPA5Q8WXQ8 436 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 TFAP2BQ92481 460 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 LPPQ93052 612 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 NKD2Q969F2 451 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 CYFIP2Q96F07 1278 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 TMEM176AQ96HP8 235 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 ZFP42Q96MM3 310 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 TWNKQ96RR1 684 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 RPS6KC1Q96S38 1066 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 OSBPL9Q96SU4 736 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 MMS19Q96T76 1030 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 NUP85Q9BW27 656 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 ELOVL4Q9GZR5 314 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 LMAN2LQ9H0V9 348 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 GOLGA2P5Q9HBQ8 144 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 SLC38A7Q9NVC3 462 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 GDAP2Q9NXN4 497 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 CTTNBP2NLQ9P2B4 639 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 UVRAGQ9P2Y5 699 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 BARX2Q9UMQ3 279 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 RWDD3Q9Y3V2 267 aa7.97□□□□□ -1.13
TPM1-231ENST00000561395 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.97□□□□□ -1.13
TPM1-231ENST00000561395 DENND4AQ7Z401 1863 aa7.96□□□□□ -1.13
TPM1-231ENST00000561395 A0A0U1RQF3 1178 aa7.96□□□□□ -1.14
TPM1-231ENST00000561395 ARL5CA6NH57 179 aa7.96□□□□□ -1.14
TPM1-231ENST00000561395 EFCAB8A8MWE9 144 aa7.96□□□□□ -1.14
TPM1-231ENST00000561395 C5orf67F2Z3F1 127 aa7.96□□□□□ -1.14
TPM1-231ENST00000561395 CES2O00748 559 aa7.96□□□□□ -1.14
TPM1-231ENST00000561395 SPTLC1O15269 473 aa7.96□□□□□ -1.14
TPM1-231ENST00000561395 MED7O43513 233 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms