RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 GABRR2P28476 465 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 BCAT1P54687 386 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 ZNF445P59923 1031 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 POLR2FP61218 127 aaKnown RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 DLX2Q07687 328 aaPredicted RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 ORC1Q13415 861 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 SMAD2Q15796 467 aaKnown RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 GOLGA7BQ2TAP0 167 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 KLHDC7AQ5VTJ3 777 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 SYCE2Q6PIF2 218 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 RSRC2Q7L4I2 434 aaKnown RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 FAM35AQ86V20 835 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 LRRTM3Q86VH5 581 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 IPO4Q8TEX9 1081 aaKnown RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 RNF139Q8WU17 664 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 FBXO32Q969P5 355 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 PSMG2Q969U7 264 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 NXPE3Q969Y0 559 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 ELMO3Q96BJ8 720 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 SPATA17Q96L03 361 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 CDK5RAP1Q96SZ6 601 aaKnown RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 HNRNPABQ99729 332 aaKnown RBP11.34□□□□□ -0.59
TPM1-229ENST00000561242 TRIM62Q9BVG3 475 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 RHOBTB2Q9BYZ6 727 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 DPEP3Q9H4B8 488 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 TRPC7Q9HCX4 862 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 PLCB1Q9NQ66 1216 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 CRTAC1Q9NQ79 661 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 PRDM6Q9NQX0 595 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 GDE1Q9NZC3 331 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 USTQ9Y2C2 406 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 F8VP50 259 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 M0QYV0 167 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 CLDN5O00501 218 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 SART1O43290 800 aaKnown RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 GLP2RO95838 553 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 SETSIPP0DME0 302 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 CCDC130P13994 396 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 UCHL3P15374 230 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 NPR3P17342 541 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 ACADSBP45954 432 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 DRAP1Q14919 205 aaPredicted RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 CNGA2Q16280 664 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 ARHGEF19Q8IW93 802 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 ADHFE1Q8IWW8 467 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 ANKRD52Q8NB46 1076 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 MCRS1Q96EZ8 462 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 UHRF1Q96T88 793 aaPredicted RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 LPIN3Q9BQK8 851 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 DUSP16Q9BY84 665 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 ZNF518BQ9C0D4 1074 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 SDCBP2Q9H190 292 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 S1PR5Q9H228 398 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 NLRC4Q9NPP4 1024 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 TLR8Q9NR97 1041 aaKnown RBP11.33□□□□□ -0.6
TPM1-229ENST00000561242 IFNKQ9P0W0 207 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 CDH7Q9ULB5 785 aa11.33□□□□□ -0.6
TPM1-229ENST00000561242 FNDC1Q4ZHG4 1894 aaPredicted RBP11.32□□□□□ -0.6
TPM1-229ENST00000561242 TRAV19A0A0A6YYK7 116 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 STK25O00506 426 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 CAPN9O14815 690 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 SOAT2O75908 522 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 MICAL2O94851 1124 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 FERP16591 822 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 ACO1P21399 889 aaKnown RBP11.32□□□□□ -0.6
TPM1-229ENST00000561242 LTBRP36941 435 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 PSEN1P49768 467 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 RAD23BP54727 409 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 ARID5AQ03989 594 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 TRIM14Q14142 442 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 IQCB1Q15051 598 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 GPR158Q5T848 1215 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
TPM1-229ENST00000561242 ARHGAP17Q68EM7 881 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 PPP1R2P3Q6NXS1 205 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 LIMS2Q7Z4I7 341 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 GJD3Q8N144 294 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 TMEM35BQ8NCS4 154 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 MED15Q96RN5 788 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 ARID3AQ99856 593 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 RTP3Q9BQQ7 232 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 UBXN6Q9BZV1 441 aa11.32□□□□□ -0.6
TPM1-229ENST00000561242 ZFP14Q9HCL3 533 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms